C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcitonin receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000421592 CALCR-001 ENSG00000004948 9606 - 7:93424492-93574480 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartLiverLungOvaryPlacentaTestisENST00000421592
Transcript ID Adipose Breast Heart Liver Lung Ovary Placenta Testis
ENST00000421592 0.017±0.00 0.024±0.00 0.010±0.00 0.072±0.00 0.035±0.00 0.008±0.00 0.246±0.07 0.057±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008E8 CIL_0008E8_0001 VISTA 7:92945640-93549905
CIL_0004SU CIL_0004SU_0002 CGP 7:93232340-93574730

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004888 IEA transmembrane signaling receptor activity
GO:0004930 IEA G-protein coupled receptor activity
GO:0007166 IEA cell surface receptor signaling pathway
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168592 Calcr-201 protein_coding Mus_musculus 0 1260
ENSMUST00000115622 Calcr-005 protein_coding Mus_musculus 0 1260
ENSMUST00000171613 Calcr-003 protein_coding Mus_musculus 0 1260
ENSMUST00000170266 Calcr-202 protein_coding Mus_musculus 0 1131
ENSMUST00000075644 Calcr-001 protein_coding Mus_musculus 0 1131
ENSMUST00000171396 Calcr-004 protein_coding Mus_musculus 0 686
ENSDART00000051943 calcr-201 protein_coding Danio_rerio 0 226
ENSDART00000131471 calcr-001 protein_coding Danio_rerio 0 226

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