C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: carnitine O-octanoyltransferase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000005469 CROT 9606 + 7:87345681-87399795 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000331536 CROT-001 87345695-87399795 protein_coding
  ENST00000412227 CROT-003 87345693-87360116 protein_coding
  ENST00000419147 CROT-002 87345681-87399481 protein_coding
  ENST00000442291 CROT-004 87346335-87398474 protein_coding
  ENST00000469785 CROT-005 87375235-87375889 retained_intron
  ENST00000479014 CROT-006 87375873-87382329 retained_intron
  ENST00000488850 CROT-007 87361443-87369696 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000331536ENST00000412227ENST00000419147ENST00000442291ENST00000479014
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000331536 1.087±0.00 1.272±0.00 1.018±0.00 0.825±0.38 1.203±0.00 1.536±0.79 0.572±0.38 3.057±1.80 3.424±0.20 0.835±0.00 1.016±0.79 3.407±2.08 9.233±3.75 1.147±0.45
ENST00000412227 N/A 0.703±0.00 N/A 0.738±0.32 N/A 0.978±0.00 0.296±0.00 1.593±0.00 1.433±0.00 N/A N/A N/A N/A N/A
ENST00000419147 0.292±0.00 N/A N/A N/A 0.357±0.00 0.650±0.00 0.932±0.00 3.098±0.00 N/A 0.279±0.00 N/A 0.483±0.00 N/A 0.922±0.00
ENST00000442291 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.163±0.00 N/A N/A N/A 0.551±0.00
ENST00000479014 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.352±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00052H CIL_00052H_0002 CGP 7:87345681-87480435

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005102 IPI receptor binding
GO:0005739 IEA mitochondrion
GO:0005777 NAS peroxisome
GO:0005782 TAS peroxisomal matrix
GO:0006091 IDA generation of precursor metabolites and energy
GO:0006631 IMP fatty acid metabolic process
GO:0006635 IDA fatty acid beta-oxidation
GO:0008152 IEA metabolic process
GO:0008458 IDA carnitine O-octanoyltransferase activity
GO:0009437 ISS carnitine metabolic process
GO:0015908 IEA fatty acid transport
GO:0015936 ISS coenzyme A metabolic process
GO:0016746 IEA transferase activity, transferring acyl groups
GO:0033540 TAS fatty acid beta-oxidation using acyl-CoA oxidase
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0051791 IDA medium-chain fatty acid metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040352 crot carnitine O-octanoyltransferase protein_coding Danio_rerio
ENSMUSG00000003623 Crot carnitine O-octanoyltransferase protein_coding Mus_musculus

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