C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00052H_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000040352-ENSDARG00000010936 CGP 7955 16:30830213-30886580
GeneTranscriptPositionBiotype
ENSDARG00000010936 (abcb4)
ATP-binding cassette, sub-family B (MDR/TAP), member 4 		ENSDART00000019720 (abcb4-201) 30877427-30886580 protein_coding
ENSDART00000035873 (abcb4-202) 30856980-30885886 protein_coding
ENSDART00000148456 (abcb4-001) 30857481-30886580 protein_coding
ENSDARG00000040352 (crot)
carnitine O-octanoyltransferase 		ENSDART00000018235 (crot-001) 30830213-30855807 protein_coding
CIL_00052H_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000005469-ENSG00000005471 CGP 9606 7:87345681-87480435
GeneTranscriptPositionBiotype
ENSG00000005469 (CROT)
carnitine O-octanoyltransferase 		ENST00000331536 (CROT-001) 87345695-87399795 protein_coding
ENST00000412227 (CROT-003) 87345693-87360116 protein_coding
ENST00000419147 (CROT-002) 87345681-87399481 protein_coding
ENST00000442291 (CROT-004) 87346335-87398474 protein_coding
ENST00000469785 (CROT-005) 87375235-87375889 retained_intron
ENST00000479014 (CROT-006) 87375873-87382329 retained_intron
ENST00000488850 (CROT-007) 87361443-87369696 retained_intron
ENSG00000005471 (ABCB4)
ATP-binding cassette, sub-family B (MDR/TAP), member 4 		ENST00000265723 (ABCB4-002) 87402049-87475739 protein_coding
ENST00000358400 (ABCB4-201) 87402045-87475703 protein_coding
ENST00000359206 (ABCB4-001) 87402045-87475659 protein_coding
ENST00000417608 (ABCB4-003) 87462861-87480435 protein_coding
ENST00000440025 (ABCB4-008) 87401697-87403201 protein_coding
ENST00000453593 (ABCB4-009) 87402096-87475465 protein_coding
ENST00000467079 (ABCB4-006) 87405920-87408234 retained_intron
ENST00000467983 (ABCB4-007) 87402134-87403379 retained_intron
ENST00000469770 (ABCB4-005) 87423575-87431500 retained_intron
ENST00000473795 (ABCB4-004) 87452372-87475472 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00052H_0001ENSDARG00000010936ENSDART00000019720ENSDART00000035873ENSDART00000148456ENSDARG00000040352ENSDART00000018235CIL_00052H_0002ENSG00000005469ENST00000331536ENST00000412227ENST00000419147ENST00000442291ENST00000469785ENST00000479014ENST00000488850ENSG00000005471ENST00000265723ENST00000358400ENST00000359206ENST00000417608ENST00000440025ENST00000453593ENST00000467079ENST00000467983ENST00000469770ENST00000473795
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00052H_0001ENSDARG00000010936ENSDART00000019720ENSDART00000035873ENSDART00000148456ENSDARG00000040352ENSDART00000018235CIL_00052H_0002ENSG00000005469ENST00000331536ENST00000412227ENST00000419147ENST00000442291ENST00000479014ENSG00000005471ENST00000265723ENST00000358400ENST00000359206ENST00000417608ENST00000440025ENST00000453593ENST00000467079ENST00000467983ENST00000469770ENST00000473795
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010936 ENSDART00000019720 N/A N/A N/A 3.296±0.00 N/A N/A 4.519±0.00 4.349±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000035873 N/A N/A N/A 5.058±2.34 N/A N/A 3.445±0.15 5.219±2.15 2.972±0.00 N/A 3.995±0.00 N/A N/A N/A
ENSDART00000148456 N/A N/A N/A 3.878±0.00 N/A N/A 2.433±0.00 3.588±0.00 2.751±0.00 N/A 1.021±0.00 N/A N/A N/A
ENSDARG00000040352 ENSDART00000018235 N/A N/A N/A 6.897±3.82 N/A N/A 16.010±2.54 12.577±2.99 0.636±0.00 N/A 7.466±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000005469 ENST00000331536 1.087±0.00 1.272±0.00 1.018±0.00 0.825±0.38 1.203±0.00 1.536±0.79 0.572±0.38 3.057±1.80 3.424±0.20 0.835±0.00 1.016±0.79 3.407±2.08 9.233±3.75 1.147±0.45
ENST00000412227 N/A 0.703±0.00 N/A 0.738±0.32 N/A 0.978±0.00 0.296±0.00 1.593±0.00 1.433±0.00 N/A N/A N/A N/A N/A
ENST00000419147 0.292±0.00 N/A N/A N/A 0.357±0.00 0.650±0.00 0.932±0.00 3.098±0.00 N/A 0.279±0.00 N/A 0.483±0.00 N/A 0.922±0.00
ENST00000442291 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.163±0.00 N/A N/A N/A 0.551±0.00
ENST00000469785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479014 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.352±0.00 N/A N/A N/A
ENST00000488850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000005471 ENST00000265723 N/A N/A N/A N/A N/A 0.170±0.00 N/A 4.272±0.00 4.988±0.00 N/A N/A N/A N/A 0.178±0.00
ENST00000358400 N/A 0.979±0.00 N/A N/A 0.269±0.00 N/A N/A N/A 2.903±0.00 N/A 0.256±0.00 0.108±0.00 0.349±0.21 0.030±0.00
ENST00000359206 N/A N/A N/A 0.062±0.00 N/A N/A 0.563±0.00 14.344±0.00 15.296±0.00 0.115±0.00 0.551±0.00 0.043±0.00 0.474±0.00 N/A
ENST00000417608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.045±0.00
ENST00000440025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.133±0.00 N/A N/A
ENST00000453593 0.276±0.00 N/A N/A 0.009±0.00 N/A 0.400±0.22 0.628±0.02 2.319±2.20 0.037±0.00 0.383±0.00 N/A 0.096±0.00 0.029±0.00 N/A
ENST00000467079 N/A 1.031±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.194±0.00 N/A
ENST00000467983 N/A N/A 1.758±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.575±0.00 N/A
ENST00000469770 N/A N/A 0.396±0.00 N/A N/A N/A N/A N/A 0.334±0.00 N/A N/A N/A N/A N/A
ENST00000473795 N/A N/A N/A N/A N/A 0.188±0.00 N/A N/A N/A N/A N/A 0.123±0.00 N/A N/A

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