C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carnitine O-octanoyltransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000331536 CROT-001 ENSG00000005469 9606 + 7:87345695-87399795 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000331536
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000331536 1.087±0.00 1.272±0.00 1.018±0.00 0.825±0.38 1.203±0.00 1.536±0.79 0.572±0.38 3.057±1.80 3.424±0.20 0.835±0.00 1.016±0.79 3.407±2.08 9.233±3.75 1.147±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00052H CIL_00052H_0002 CGP 7:87345681-87480435

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 IPI receptor binding
GO:0005777 NAS peroxisome
GO:0005782 TAS peroxisomal matrix
GO:0006091 IDA generation of precursor metabolites and energy
GO:0006631 IMP fatty acid metabolic process
GO:0006635 IDA fatty acid beta-oxidation
GO:0008458 IDA carnitine O-octanoyltransferase activity
GO:0009437 ISS carnitine metabolic process
GO:0015936 ISS coenzyme A metabolic process
GO:0016746 IEA transferase activity, transferring acyl groups
GO:0033540 TAS fatty acid beta-oxidation using acyl-CoA oxidase
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0051791 IDA medium-chain fatty acid metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003720 Crot-001 protein_coding Mus_musculus 0 1965
ENSMUST00000157024 Crot-002 retained_intron Mus_musculus 0 676

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