C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carnitine O-octanoyltransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000412227 CROT-003 ENSG00000005469 9606 + 7:87345693-87360116 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartKidneyLiverENST00000412227
Transcript ID Adrenal Brain Colon Heart Kidney Liver
ENST00000412227 0.703±0.00 0.738±0.32 0.978±0.00 0.296±0.00 1.593±0.00 1.433±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00052H CIL_00052H_0002 CGP 7:87345681-87480435

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 IPI receptor binding
GO:0005777 NAS peroxisome
GO:0005782 TAS peroxisomal matrix
GO:0006091 IDA generation of precursor metabolites and energy
GO:0006631 IMP fatty acid metabolic process
GO:0006635 IDA fatty acid beta-oxidation
GO:0008458 IDA carnitine O-octanoyltransferase activity
GO:0009437 ISS carnitine metabolic process
GO:0015936 ISS coenzyme A metabolic process
GO:0016746 IEA transferase activity, transferring acyl groups
GO:0033540 TAS fatty acid beta-oxidation using acyl-CoA oxidase
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0051791 IDA medium-chain fatty acid metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000157024 Crot-002 retained_intron Mus_musculus 0 320
ENSMUST00000003720 Crot-001 protein_coding Mus_musculus 0 320

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