C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calcium channel, voltage-dependent, T type, alpha 1G subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000006283 CACNA1G 9606 + 17:50561068-50627474 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000352832 CACNA1G-001 50561088-50627474 protein_coding
  ENST00000354983 CACNA1G-201 50561068-50627465 protein_coding
  ENST00000358244 CACNA1G-027 50561460-50627265 protein_coding
  ENST00000359106 CACNA1G-013 50561460-50627265 protein_coding
  ENST00000360761 CACNA1G-008 50561068-50627070 protein_coding
  ENST00000416767 CACNA1G-023 50561432-50606472 protein_coding
  ENST00000429973 CACNA1G-007 50561460-50627070 protein_coding
  ENST00000442258 CACNA1G-019 50561285-50627070 protein_coding
  ENST00000502264 CACNA1G-031 50561460-50626751 protein_coding
  ENST00000503436 CACNA1G-017 50561460-50626766 nonsense_mediated_decay
  ENST00000503485 CACNA1G-005 50561460-50626766 protein_coding
  ENST00000503607 CACNA1G-033 50561460-50626766 nonsense_mediated_decay
  ENST00000504076 CACNA1G-014 50561460-50626766 nonsense_mediated_decay
  ENST00000505165 CACNA1G-032 50561460-50626766 protein_coding
  ENST00000506406 CACNA1G-012 50561460-50626766 nonsense_mediated_decay
  ENST00000506520 CACNA1G-029 50599725-50607510 protein_coding
  ENST00000507336 CACNA1G-011 50561460-50626766 protein_coding
  ENST00000507510 CACNA1G-009 50561460-50626766 protein_coding
  ENST00000507609 CACNA1G-016 50561460-50626766 protein_coding
  ENST00000507896 CACNA1G-028 50561460-50626766 protein_coding
  ENST00000510115 CACNA1G-018 50561460-50626766 protein_coding
  ENST00000510366 CACNA1G-004 50561460-50626766 protein_coding
  ENST00000511765 CACNA1G-010 50561460-50626766 nonsense_mediated_decay
  ENST00000511768 CACNA1G-030 50561460-50626766 nonsense_mediated_decay
  ENST00000512389 CACNA1G-024 50561460-50626766 protein_coding
  ENST00000513689 CACNA1G-015 50561460-50626766 protein_coding
  ENST00000513964 CACNA1G-002 50561460-50626766 protein_coding
  ENST00000514079 CACNA1G-026 50561460-50626766 protein_coding
  ENST00000514181 CACNA1G-021 50561460-50626766 protein_coding
  ENST00000514717 CACNA1G-003 50561460-50626766 protein_coding
  ENST00000515165 CACNA1G-020 50561460-50626766 protein_coding
  ENST00000515411 CACNA1G-034 50561460-50626766 protein_coding
  ENST00000515765 CACNA1G-025 50561460-50626766 protein_coding
  ENST00000570567 CACNA1G-035 50569165-50573674 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000358244ENST00000359106ENST00000360761ENST00000416767ENST00000429973ENST00000442258ENST00000503436ENST00000503607ENST00000506520ENST00000507609ENST00000510366ENST00000511768ENST00000513964ENST00000514079ENST00000514181ENST00000514717ENST00000570567
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000358244 N/A N/A N/A N/A N/A N/A N/A 0.003±0.00 N/A N/A N/A 0.045±0.00 N/A
ENST00000359106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.036±0.00 N/A
ENST00000360761 N/A 0.076±0.00 0.685±0.00 N/A N/A N/A N/A N/A N/A N/A 2.169±1.86 0.090±0.00 0.285±0.02
ENST00000416767 N/A N/A N/A N/A 0.063±0.00 0.063±0.00 N/A N/A N/A 0.153±0.00 0.014±0.00 N/A N/A
ENST00000429973 N/A N/A 0.921±0.00 N/A N/A N/A N/A 0.003±0.00 N/A N/A N/A 0.217±0.00 N/A
ENST00000442258 N/A N/A 0.990±0.00 N/A N/A 0.082±0.00 N/A 0.005±0.00 0.237±0.00 N/A 1.146±1.39 0.217±0.09 N/A
ENST00000503436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.914±0.00 N/A N/A
ENST00000503607 0.007±0.00 N/A N/A 0.039±0.02 0.097±0.00 N/A 0.002±0.00 N/A N/A 0.001±0.00 N/A N/A N/A
ENST00000506520 0.071±0.00 0.264±0.00 N/A 0.149±0.00 N/A 0.043±0.00 0.015±0.00 N/A N/A N/A N/A N/A 0.380±0.00
ENST00000507609 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.108±0.00 N/A
ENST00000510366 N/A N/A 0.509±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511768 N/A N/A N/A 0.017±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513964 N/A N/A 0.227±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514079 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.169±0.00 N/A N/A
ENST00000514181 N/A N/A N/A 0.052±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514717 0.019±0.00 N/A N/A 0.013±0.00 N/A N/A 0.007±0.00 N/A N/A 0.006±0.00 N/A 0.223±0.00 N/A
ENST00000570567 N/A N/A N/A N/A 0.040±0.00 0.034±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004X2 CIL_0004X2_0002 CGP 17:50543058-50627474

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001508 IEA action potential
GO:0002027 IEA regulation of heart rate
GO:0005216 IEA ion channel activity
GO:0005244 IEA voltage-gated ion channel activity
GO:0005245 IEA voltage-gated calcium channel activity
GO:0005515 IEA protein binding
GO:0005886 IBA plasma membrane
GO:0005891 IEA voltage-gated calcium channel complex
GO:0006810 TAS transport
GO:0006811 IEA ion transport
GO:0007268 IEA synaptic transmission
GO:0007411 TAS axon guidance
GO:0008332 IDA low voltage-gated calcium channel activity
GO:0010045 IEA response to nickel cation
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0034220 IEA ion transmembrane transport
GO:0034765 IEA regulation of ion transmembrane transport
GO:0042391 IDA regulation of membrane potential
GO:0045956 IBA positive regulation of calcium ion-dependent exocytosis
GO:0055085 IEA transmembrane transport
GO:0060371 IEA regulation of atrial cardiac muscle cell membrane depolarization
GO:0070509 IDA calcium ion import
GO:0070588 IEA calcium ion transmembrane transport
GO:0086010 IBA membrane depolarization during action potential
GO:0097110 IPI scaffold protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089913 cacna1g calcium channel, voltage-dependent, T type, alpha 1G subunit protein_coding Danio_rerio
ENSMUSG00000020866 Cacna1g calcium channel, voltage-dependent, T type, alpha 1G subunit protein_coding Mus_musculus

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