C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium channel, voltage-dependent, T type, alpha 1G subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000506520 CACNA1G-029 ENSG00000006283 9606 + 17:50599725-50607510 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartKidneyTestisENST00000506520
Transcript ID Adipose Adrenal Breast Heart Kidney Testis
ENST00000506520 0.071±0.00 0.264±0.00 0.149±0.00 0.043±0.00 0.015±0.00 0.380±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004X2 CIL_0004X2_0002 CGP 17:50543058-50627474

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005244 IEA voltage-gated ion channel activity
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0034220 IEA ion transmembrane transport
GO:0034765 IEA regulation of ion transmembrane transport
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021234 Cacna1g-201 protein_coding Mus_musculus 0 1269
ENSMUST00000107785 Cacna1g-006 protein_coding Mus_musculus 0 1269
ENSMUST00000107789 Cacna1g-011 protein_coding Mus_musculus 0 1269
ENSMUST00000107790 Cacna1g-010 protein_coding Mus_musculus 0 1269
ENSMUST00000107788 Cacna1g-009 protein_coding Mus_musculus 0 1269
ENSMUST00000107793 Cacna1g-008 protein_coding Mus_musculus 0 1269
ENSMUST00000100561 Cacna1g-005 protein_coding Mus_musculus 0 1269
ENSMUST00000107792 Cacna1g-004 protein_coding Mus_musculus 0 1269
ENSMUST00000103166 Cacna1g-003 protein_coding Mus_musculus 0 1269
ENSMUST00000107791 Cacna1g-002 protein_coding Mus_musculus 0 1269
ENSMUST00000107786 Cacna1g-001 protein_coding Mus_musculus 0 1269
ENSMUST00000152811 Cacna1g-007 processed_transcript Mus_musculus 0 1155

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