C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004X2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000013880-ENSDARG00000089913 CGP 7955 12:29160638-29637717
GeneTranscriptPositionBiotype
ENSDARG00000013880 (spata20)
spermatogenesis associated 20 		ENSDART00000066288 (spata20-001) 29160638-29236622 protein_coding
ENSDARG00000085910 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000121310 (5S_rRNA.1421-201) 29523764-29523881 rRNA
ENSDARG00000089913 (cacna1g)
calcium channel, voltage-dependent, T type, alpha 1G subunit 		ENSDART00000123534 (cacna1g-201) 29276263-29637717 protein_coding
ENSDART00000153256 (cacna1g-001) 29275046-29604210 protein_coding
CIL_0004X2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000006282-ENSG00000006283 CGP 9606 17:50543058-50627474
GeneTranscriptPositionBiotype
ENSG00000006282 (SPATA20)
spermatogenesis associated 20 		ENST00000006658 (SPATA20-001) 50547089-50555852 protein_coding
ENST00000356488 (SPATA20-004) 50547126-50555852 protein_coding
ENST00000393244 (SPATA20-201) 50547201-50555850 protein_coding
ENST00000502911 (SPATA20-010) 50547153-50549329 nonsense_mediated_decay
ENST00000503063 (SPATA20-008) 50548013-50555852 retained_intron
ENST00000503127 (SPATA20-003) 50547127-50555850 nonsense_mediated_decay
ENST00000504265 (SPATA20-022) 50550108-50551384 retained_intron
ENST00000504271 (SPATA20-012) 50550734-50551939 retained_intron
ENST00000504334 (SPATA20-002) 50543058-50555850 nonsense_mediated_decay
ENST00000505085 (SPATA20-009) 50547129-50548618 nonsense_mediated_decay
ENST00000505336 (SPATA20-018) 50548060-50548814 retained_intron
ENST00000505456 (SPATA20-014) 50547184-50549304 nonsense_mediated_decay
ENST00000505559 (SPATA20-005) 50547205-50550891 nonsense_mediated_decay
ENST00000505656 (SPATA20-021) 50548883-50550851 retained_intron
ENST00000508528 (SPATA20-024) 50550272-50551985 nonsense_mediated_decay
ENST00000508598 (SPATA20-015) 50547205-50548581 retained_intron
ENST00000510917 (SPATA20-011) 50547161-50548863 nonsense_mediated_decay
ENST00000511347 (SPATA20-020) 50548850-50551072 nonsense_mediated_decay
ENST00000511605 (SPATA20-013) 50547180-50548172 retained_intron
ENST00000511845 (SPATA20-017) 50547209-50548902 retained_intron
ENST00000511937 (SPATA20-006) 50547999-50555852 processed_transcript
ENST00000512181 (SPATA20-007) 50548019-50550802 retained_intron
ENST00000512416 (SPATA20-019) 50548076-50549409 retained_intron
ENST00000513618 (SPATA20-025) 50550400-50551108 retained_intron
ENST00000515526 (SPATA20-016) 50547209-50548703 retained_intron
ENST00000515619 (SPATA20-023) 50550212-50551669 retained_intron
ENST00000619622 (SPATA20-202) 50547089-50555850 protein_coding
ENSG00000049283 (EPN3)
epsin 3 		ENST00000268933 (EPN3-001) 50532543-50543750 protein_coding
ENST00000503246 (EPN3-008) 50532682-50537061 protein_coding
ENST00000503690 (EPN3-009) 50532725-50536591 protein_coding
ENST00000504857 (EPN3-014) 50532764-50536470 processed_transcript
ENST00000507467 (EPN3-018) 50534558-50536964 protein_coding
ENST00000507709 (EPN3-015) 50534492-50536726 protein_coding
ENST00000507998 (EPN3-013) 50532738-50536754 processed_transcript
ENST00000510045 (EPN3-002) 50532758-50542364 nonsense_mediated_decay
ENST00000510462 (EPN3-011) 50532738-50536346 processed_transcript
ENST00000511414 (EPN3-016) 50534552-50536803 processed_transcript
ENST00000512291 (EPN3-005) 50532738-50541941 nonsense_mediated_decay
ENST00000512379 (EPN3-004) 50532738-50542486 nonsense_mediated_decay
ENST00000514874 (EPN3-010) 50532725-50536709 protein_coding
ENST00000515028 (EPN3-012) 50532738-50536379 processed_transcript
ENST00000515126 (EPN3-017) 50534555-50536882 protein_coding
ENST00000537145 (EPN3-201) 50536427-50542496 protein_coding
ENST00000571402 (EPN3-020) 50532738-50536536 processed_transcript
ENST00000574464 (EPN3-019) 50536427-50542121 nonsense_mediated_decay
ENSG00000250107 (CACNA1G-AS1)
CACNA1G antisense RNA 1 		ENST00000505495 (CACNA1G-AS1-002) 50556604-50559450 antisense
ENST00000505793 (CACNA1G-AS1-001) 50556207-50562108 antisense
ENST00000508920 (CACNA1G-AS1-003) 50557174-50559410 antisense
ENSG00000251239 (CTB-22K21.2)
 ENST00000502435 (CTB-22K21.2-001) 50627032-50631940 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004X2_0001ENSDARG00000013880ENSDART00000066288ENSDARG00000085910ENSDART00000121310ENSDARG00000089913ENSDART00000123534ENSDART00000153256CIL_0004X2_0002ENSG00000006282ENST00000006658ENST00000356488ENST00000393244ENST00000502911ENST00000503063ENST00000503127ENST00000504265ENST00000504271ENST00000504334ENST00000505085ENST00000505336ENST00000505456ENST00000505559ENST00000505656ENST00000508528ENST00000508598ENST00000510917ENST00000511347ENST00000511605ENST00000511845ENST00000511937ENST00000512181ENST00000512416ENST00000513618ENST00000515526ENST00000515619ENST00000619622ENSG00000049283ENST00000268933ENST00000503246ENST00000503690ENST00000504857ENST00000507467ENST00000507709ENST00000507998ENST00000510045ENST00000510462ENST00000511414ENST00000512291ENST00000512379ENST00000514874ENST00000515028ENST00000515126ENST00000537145ENST00000571402ENST00000574464ENSG00000250107ENST00000505495ENST00000505793ENST00000508920ENSG00000251239ENST00000502435
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004X2_0001ENSDARG00000013880ENSDART00000066288ENSDARG00000085910ENSDART00000121310ENSDARG00000089913ENSDART00000123534ENSDART00000153256CIL_0004X2_0002ENSG00000006282ENST00000006658ENST00000356488ENST00000393244ENST00000503063ENST00000503127ENST00000504265ENST00000505456ENST00000505656ENST00000508528ENST00000510917ENST00000511347ENST00000511937ENST00000512181ENST00000515619ENSG00000049283ENST00000268933ENST00000512379ENST00000574464ENSG00000250107ENST00000505495ENST00000505793ENST00000508920ENSG00000251239ENST00000502435
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000013880 ENSDART00000066288 N/A N/A N/A 6.185±2.16 N/A N/A 7.523±7.08 1.549±1.72 1.393±0.00 N/A 8.636±0.00 N/A N/A N/A
ENSDARG00000085910 ENSDART00000121310 N/A N/A N/A 8.653±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000089913 ENSDART00000123534 N/A N/A N/A 4.861±2.42 N/A N/A 6.490±2.07 N/A N/A N/A 0.482±0.00 N/A N/A N/A
ENSDART00000153256 N/A N/A N/A N/A N/A N/A N/A 0.142±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000006282 ENST00000006658 5.262±0.00 6.983±0.00 N/A 5.165±3.82 N/A 1.690±0.00 5.625±3.59 11.272±0.00 2.197±0.00 8.387±0.00 1.450±0.00 10.534±6.03 9.398±0.00 N/A
ENST00000356488 N/A N/A 3.017±0.00 3.772±0.00 N/A N/A 2.250±0.00 N/A N/A 0.963±0.00 3.178±0.00 18.937±0.08 5.493±0.00 53.179±0.00
ENST00000393244 3.646±0.00 11.517±0.00 N/A 12.602±0.00 9.610±6.90 3.067±0.00 8.492±0.00 N/A 4.851±0.00 N/A 8.073±0.00 8.970±0.00 N/A 33.960±0.00
ENST00000502911 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503063 N/A N/A N/A 0.693±0.00 N/A 1.311±0.29 N/A 4.417±0.00 0.863±0.00 N/A N/A 6.852±1.38 N/A 9.167±2.19
ENST00000503127 N/A N/A N/A N/A 3.519±0.00 3.073±0.00 6.094±0.00 3.060±0.00 1.464±0.00 5.303±0.00 N/A 12.014±2.99 7.539±4.72 N/A
ENST00000504265 N/A N/A N/A N/A 3.503±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505456 N/A N/A N/A N/A N/A N/A N/A N/A 2.113±0.00 N/A N/A N/A N/A N/A
ENST00000505559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505656 N/A N/A N/A N/A N/A 4.727±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508528 N/A N/A N/A N/A N/A N/A N/A 10.442±0.00 N/A N/A N/A N/A N/A N/A
ENST00000508598 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510917 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.341±0.00 N/A N/A N/A N/A
ENST00000511347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 37.967±0.00
ENST00000511605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.560±0.00
ENST00000512181 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.737±0.00 N/A N/A
ENST00000512416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513618 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515526 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515619 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.335±0.00 N/A 5.167±0.00 N/A N/A
ENST00000619622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000049283 ENST00000268933 N/A N/A 0.716±0.00 N/A N/A 0.781±0.00 N/A N/A N/A N/A N/A 6.269±0.83 3.441±1.60 N/A
ENST00000503246 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.953±1.65 N/A
ENST00000514874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.054±0.00 8.204±1.29 N/A
ENSG00000250107 ENST00000505495 N/A N/A N/A N/A 0.083±0.00 N/A N/A N/A N/A N/A N/A N/A 0.128±0.00 0.130±0.00
ENST00000505793 N/A 0.177±0.00 N/A 0.211±0.06 N/A 0.043±0.00 0.029±0.01 0.074±0.03 N/A N/A N/A 0.915±1.11 0.058±0.00 0.112±0.08
ENST00000508920 N/A N/A N/A N/A N/A N/A 0.129±0.00 N/A N/A N/A N/A N/A 0.173±0.00 N/A
ENSG00000251239 ENST00000502435 N/A 0.172±0.00 N/A N/A 0.649±0.00 N/A N/A N/A N/A 0.307±0.00 N/A N/A N/A N/A

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