C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho GTPase activating protein 44
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000006740 ARHGAP44 9606 + 17:12789539-12991643 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262444 ARHGAP44-009 12789760-12990584 protein_coding
  ENST00000340825 ARHGAP44-001 12789539-12991643 protein_coding
  ENST00000379672 ARHGAP44-011 12789539-12991642 protein_coding
  ENST00000538915 ARHGAP44-007 12949681-12959045 retained_intron
  ENST00000544416 ARHGAP44-010 12789760-12990584 nonsense_mediated_decay
  ENST00000578087 ARHGAP44-005 12973712-12981047 processed_transcript
  ENST00000578442 ARHGAP44-003 12790491-12929381 retained_intron
  ENST00000580768 ARHGAP44-002 12789540-12991642 nonsense_mediated_decay
  ENST00000581437 ARHGAP44-006 12980108-12985033 protein_coding
  ENST00000583608 ARHGAP44-012 12955764-12974310 protein_coding
  ENST00000584974 ARHGAP44-013 12984489-12988916 retained_intron
  ENST00000616670 ARHGAP44-201 12944120-12959043 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000262444ENST00000340825ENST00000379672ENST00000544416ENST00000580768ENST00000584974
Transcript ID Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000262444 N/A N/A 1.704±0.00 N/A N/A N/A N/A 1.024±0.00 N/A N/A N/A N/A
ENST00000340825 0.666±0.00 N/A 5.866±3.75 1.189±0.00 1.651±0.20 2.742±0.00 0.093±0.00 4.389±0.00 N/A 1.164±0.00 3.411±0.56 2.592±0.00
ENST00000379672 N/A N/A 3.732±2.29 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544416 N/A N/A 3.436±0.00 N/A 4.100±0.00 N/A N/A N/A 0.528±0.00 N/A 1.595±0.00 0.669±0.00
ENST00000580768 N/A N/A N/A N/A N/A N/A 0.274±0.00 1.500±0.00 0.551±0.00 0.213±0.00 2.340±0.00 0.495±0.00
ENST00000584974 N/A 0.191±0.00 N/A 0.244±0.01 0.569±0.00 N/A 0.144±0.10 N/A N/A 0.410±0.30 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QC CIL_0008QC_0001 VISTA 17:12429509-13031929

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005515 IEA protein binding
GO:0005543 IDA phospholipid binding
GO:0005622 IEA intracellular
GO:0005737 IEA cytoplasm
GO:0005768 IEA endosome
GO:0005829 TAS cytosol
GO:0006887 IEA exocytosis
GO:0007165 IEA signal transduction
GO:0007264 TAS small GTPase mediated signal transduction
GO:0030054 IEA cell junction
GO:0031256 IDA leading edge membrane
GO:0042995 IEA cell projection
GO:0043547 IEA positive regulation of GTPase activity
GO:0045202 IEA synapse
GO:0051056 TAS regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010433 ARHGAP44 (1 of 2) Rho GTPase activating protein 44 protein_coding Danio_rerio
ENSDARG00000068008 arhgap44 Rho GTPase activating protein 44 protein_coding Danio_rerio
ENSMUSG00000033389 Arhgap44 Rho GTPase activating protein 44 protein_coding Mus_musculus

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