C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 44
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000544416 ARHGAP44-010 ENSG00000006740 9606 + 17:12789760-12990584 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonMusclePlacentaTestisENST00000544416
Transcript ID Brain Colon Muscle Placenta Testis
ENST00000544416 3.436±0.00 4.100±0.00 0.528±0.00 1.595±0.00 0.669±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QC CIL_0008QC_0001 VISTA 17:12429509-13031929

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005737 IEA cytoplasm
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047463 Arhgap44-004 protein_coding Mus_musculus 0 2111
ENSMUST00000093002 Arhgap44-001 protein_coding Mus_musculus 0 2111
ENSMUST00000130420 Arhgap44-003 protein_coding Mus_musculus 0 1515
ENSDART00000056127 ARHGAP44 (1 of 2)-001 protein_coding Danio_rerio 0 926
ENSDART00000152862 arhgap44-001 protein_coding Danio_rerio 0 798
ENSDART00000098100 arhgap44-201 protein_coding Danio_rerio 0 726
ENSMUST00000093001 Arhgap44-002 protein_coding Mus_musculus 0 654

Loading