C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 44
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000580768 ARHGAP44-002 ENSG00000006740 9606 + 17:12789540-12991642 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverLungMuscleOvaryPlacentaTestisENST00000580768
Transcript ID Liver Lung Muscle Ovary Placenta Testis
ENST00000580768 0.274±0.00 1.500±0.00 0.551±0.00 0.213±0.00 2.340±0.00 0.495±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QC CIL_0008QC_0001 VISTA 17:12429509-13031929

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047463 Arhgap44-004 protein_coding Mus_musculus 0 2207
ENSMUST00000130420 Arhgap44-003 protein_coding Mus_musculus 0 2124
ENSMUST00000093002 Arhgap44-001 protein_coding Mus_musculus 0 1838
ENSDART00000056127 ARHGAP44 (1 of 2)-001 protein_coding Danio_rerio 0 645
ENSDART00000152862 arhgap44-001 protein_coding Danio_rerio 0 536
ENSDART00000098100 arhgap44-201 protein_coding Danio_rerio 0 501
ENSMUST00000093001 Arhgap44-002 protein_coding Mus_musculus 0 497

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