C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: LUC7-like (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000007392 LUC7L 9606 - 16:188969-229463 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000293872 LUC7L-003 188969-229450 protein_coding
  ENST00000337351 LUC7L-001 188969-229463 protein_coding
  ENST00000397780 LUC7L-007 189896-227686 protein_coding
  ENST00000397783 LUC7L-002 188971-229463 protein_coding
  ENST00000418978 LUC7L-009 190122-229374 nonsense_mediated_decay
  ENST00000419516 LUC7L-004 189896-229434 nonsense_mediated_decay
  ENST00000426094 LUC7L-006 188969-229439 nonsense_mediated_decay
  ENST00000428363 LUC7L-020 220649-228722 protein_coding
  ENST00000429378 LUC7L-016 188990-206087 protein_coding
  ENST00000430864 LUC7L-015 190541-229422 protein_coding
  ENST00000442701 LUC7L-018 189115-190549 protein_coding
  ENST00000443357 LUC7L-012 206004-227656 protein_coding
  ENST00000464711 LUC7L-008 189098-209773 retained_intron
  ENST00000467552 LUC7L-011 228124-228990 retained_intron
  ENST00000468732 LUC7L-017 188990-190595 retained_intron
  ENST00000469109 LUC7L-013 220171-227614 retained_intron
  ENST00000490762 LUC7L-005 188990-229451 retained_intron
  ENST00000494366 LUC7L-010 208633-229142 processed_transcript
  ENST00000494545 LUC7L-019 228229-229340 retained_intron
  ENST00000495349 LUC7L-014 190001-208508 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000293872ENST00000337351ENST00000397780ENST00000397783ENST00000418978ENST00000419516ENST00000426094ENST00000429378ENST00000430864ENST00000442701ENST00000443357ENST00000464711ENST00000468732ENST00000469109ENST00000490762ENST00000495349
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000293872 N/A N/A 1.763±0.00 N/A N/A 2.537±0.00 N/A N/A N/A 3.478±0.00 N/A 8.389±1.31 20.482±0.00
ENST00000337351 N/A 6.849±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 4.828±0.00 2.783±0.00 N/A
ENST00000397780 N/A N/A N/A N/A 1.727±0.00 N/A N/A N/A N/A N/A 8.603±0.00 N/A N/A
ENST00000397783 3.136±0.00 N/A N/A N/A 5.312±0.00 N/A N/A N/A N/A N/A 9.557±3.80 3.179±0.00 13.420±0.00
ENST00000418978 N/A N/A N/A N/A N/A N/A N/A 2.401±0.00 N/A N/A N/A N/A 21.678±0.00
ENST00000419516 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.406±0.00 5.980±0.00 N/A N/A
ENST00000426094 N/A N/A 3.220±0.00 N/A N/A 0.378±0.00 N/A N/A N/A N/A N/A 2.753±0.00 N/A
ENST00000429378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 44.916±0.00 N/A 24.664±0.00
ENST00000430864 N/A N/A 14.776±0.00 16.257±0.00 16.700±0.00 N/A 13.313±12.58 4.068±0.00 25.435±0.00 N/A 10.629±0.00 6.871±0.00 34.051±0.50
ENST00000442701 N/A N/A N/A N/A 30.385±0.00 N/A 51.826±0.00 N/A N/A 17.459±0.00 N/A N/A N/A
ENST00000443357 N/A N/A N/A 6.339±0.00 N/A N/A N/A N/A 8.638±0.00 N/A N/A N/A N/A
ENST00000464711 N/A N/A N/A N/A N/A 0.477±0.00 N/A 0.842±0.00 N/A N/A 2.890±1.18 N/A N/A
ENST00000468732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 32.340±0.00 11.609±0.00 N/A
ENST00000469109 N/A N/A N/A N/A N/A 0.783±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000490762 1.437±0.00 N/A 2.331±0.00 2.690±0.78 N/A 1.243±0.00 3.888±0.00 0.980±0.00 3.256±0.00 N/A 2.763±0.18 N/A N/A
ENST00000495349 N/A N/A 2.464±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094P CIL_00094P_0001 VISTA 16:-195470-405616
CIL_0008HK CIL_0008HK_0001 VISTA 16:-187027-414801

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003729 IEA mRNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005685 IEA U1 snRNP
GO:0006376 IEA mRNA splice site selection
GO:0042802 IPI identical protein binding
GO:0045843 IEA negative regulation of striated muscle tissue development
GO:0050733 IEA RS domain binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055903 luc7l LUC7-like (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000024188 Luc7l Luc7 homolog (S. cerevisiae)-like protein_coding Mus_musculus

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