C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LUC7-like (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000430864 LUC7L-015 ENSG00000007392 9606 - 16:190541-229422 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000430864
Transcript ID Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000430864 14.776±0.00 16.257±0.00 16.700±0.00 13.313±12.58 4.068±0.00 25.435±0.00 10.629±0.00 6.871±0.00 34.051±0.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094P CIL_00094P_0001 VISTA 16:-195470-405616
CIL_0008HK CIL_0008HK_0001 VISTA 16:-187027-414801

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003729 IEA mRNA binding
GO:0005685 IEA U1 snRNP
GO:0006376 IEA mRNA splice site selection

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000140427 Luc7l-010 protein_coding Mus_musculus 0 811
ENSMUST00000148894 Luc7l-001 nonsense_mediated_decay Mus_musculus 0 736
ENSMUST00000133032 Luc7l-004 retained_intron Mus_musculus 0 736
ENSMUST00000154235 Luc7l-005 nonsense_mediated_decay Mus_musculus 0 736
ENSMUST00000119928 Luc7l-008 protein_coding Mus_musculus 0 736
ENSMUST00000114976 Luc7l-003 protein_coding Mus_musculus 0 736
ENSMUST00000025023 Luc7l-002 protein_coding Mus_musculus 0 736
ENSMUST00000152107 Luc7l-009 protein_coding Mus_musculus 3e-26 122

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