C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Luc7 homolog (S. cerevisiae)-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024188 Luc7l 10090 + 17:26252910-26285504 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025023 Luc7l-002 26252910-26280719 protein_coding
  ENSMUST00000114976 Luc7l-003 26252951-26285504 protein_coding
  ENSMUST00000119928 Luc7l-008 26252966-26281990 protein_coding
  ENSMUST00000129226 Luc7l-007 26253385-26254252 processed_transcript
  ENSMUST00000133032 Luc7l-004 26252984-26280720 retained_intron
  ENSMUST00000140427 Luc7l-010 26252956-26277634 protein_coding
  ENSMUST00000148894 Luc7l-001 26252999-26280723 nonsense_mediated_decay
  ENSMUST00000152107 Luc7l-009 26267275-26281968 protein_coding
  ENSMUST00000154235 Luc7l-005 26252966-26281992 nonsense_mediated_decay
  ENSMUST00000155151 Luc7l-006 26253222-26266393 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025023ENSMUST00000114976ENSMUST00000119928ENSMUST00000133032ENSMUST00000140427ENSMUST00000148894ENSMUST00000154235
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025023 7.739±0.46 9.779±1.31 N/A N/A 4.975±0.55 5.660±0.69 N/A 5.281±1.03 6.085±1.36 5.218±0.04 1.921±0.31 13.721±3.16 8.239±2.93 4.511±0.84
ENSMUST00000114976 2.792±0.00 N/A 7.468±1.59 12.052±3.65 5.804±0.00 N/A 1.054±0.00 N/A 3.986±2.00 1.687±0.00 1.342±0.52 4.981±1.19 3.820±1.28 N/A
ENSMUST00000119928 N/A N/A N/A 20.837±0.00 N/A N/A N/A N/A N/A N/A N/A 24.297±0.00 15.735±3.51 10.122±0.00
ENSMUST00000133032 5.363±0.00 N/A 7.496±2.14 8.660±0.00 4.058±0.10 N/A 2.991±0.64 1.919±0.00 4.757±2.10 N/A 1.674±0.51 12.439±0.49 5.061±2.71 N/A
ENSMUST00000140427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 84.983±0.00 38.312±12.17 34.780±0.00
ENSMUST00000148894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.026±0.25 12.333±0.00 5.660±1.12 N/A
ENSMUST00000154235 N/A 12.030±6.90 N/A N/A 2.617±0.00 1.852±0.04 N/A N/A 2.975±1.12 3.082±0.00 0.985±0.00 5.498±1.59 3.476±0.64 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KN CIL_0008KN_0002 VISTA 17:26208852-26810691
CIL_0002RY CIL_0002RY_0002 CGP 17:26211822-26285504

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003729 IEA mRNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005685 IEA U1 snRNP
GO:0006376 IEA mRNA splice site selection
GO:0042802 IEA identical protein binding
GO:0045843 IDA negative regulation of striated muscle tissue development
GO:0050733 IPI RS domain binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055903 luc7l LUC7-like (S. cerevisiae) protein_coding Danio_rerio
ENSG00000007392 LUC7L LUC7-like (S. cerevisiae) protein_coding Homo_sapiens

Loading