C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LUC7-like (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000293872 LUC7L-003 ENSG00000007392 9606 - 16:188969-229450 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartMusclePlacentaTestisENST00000293872
Transcript ID Brain Heart Muscle Placenta Testis
ENST00000293872 1.763±0.00 2.537±0.00 3.478±0.00 8.389±1.31 20.482±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094P CIL_00094P_0001 VISTA 16:-195470-405616
CIL_0008HK CIL_0008HK_0001 VISTA 16:-187027-414801

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003729 IEA mRNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005685 IEA U1 snRNP
GO:0006376 IEA mRNA splice site selection
GO:0042802 IPI identical protein binding
GO:0045843 IEA negative regulation of striated muscle tissue development
GO:0050733 IEA RS domain binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114976 Luc7l-003 protein_coding Mus_musculus 0 1679
ENSMUST00000154235 Luc7l-005 nonsense_mediated_decay Mus_musculus 0 1567
ENSMUST00000119928 Luc7l-008 protein_coding Mus_musculus 0 1373
ENSMUST00000025023 Luc7l-002 protein_coding Mus_musculus 0 1373
ENSMUST00000133032 Luc7l-004 retained_intron Mus_musculus 0 1260
ENSMUST00000148894 Luc7l-001 nonsense_mediated_decay Mus_musculus 0 1258
ENSMUST00000140427 Luc7l-010 protein_coding Mus_musculus 0 697
ENSMUST00000152107 Luc7l-009 protein_coding Mus_musculus 0 628
ENSMUST00000155151 Luc7l-006 protein_coding Mus_musculus 0 466

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