C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CD9 molecule
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000010278 CD9 9606 + 12:6199715-6238271 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000009180 CD9-001 6200449-6238259 protein_coding
  ENST00000382515 CD9-003 6200797-6238259 protein_coding
  ENST00000382518 CD9-004 6199715-6238261 protein_coding
  ENST00000382519 CD9-010 6200385-6236270 protein_coding
  ENST00000481267 CD9-002 6224986-6238259 processed_transcript
  ENST00000536586 CD9-011 6199875-6235305 protein_coding
  ENST00000538418 CD9-008 6200436-6225736 processed_transcript
  ENST00000538834 CD9-007 6200412-6233488 processed_transcript
  ENST00000540891 CD9-009 6232186-6236262 processed_transcript
  ENST00000543916 CD9-005 6199844-6233262 processed_transcript
  ENST00000546073 CD9-006 6200400-6233428 processed_transcript
  ENST00000610354 CD9-201 6200316-6238271 protein_coding
  ENST00000617871 CD9-202 6200389-6238261 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000009180ENST00000382519ENST00000538418ENST00000610354ENST00000617871
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000009180 N/A N/A N/A N/A N/A N/A N/A 9.119±0.00 N/A 23.286±0.00 3.198±1.37 50.047±28.08 14.304±5.62 N/A
ENST00000382519 N/A N/A N/A 39.212±0.00 N/A N/A 13.962±0.00 52.683±0.00 5.536±0.00 110.969±0.00 5.714±0.00 N/A N/A N/A
ENST00000538418 N/A N/A N/A N/A N/A N/A 3.017±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000610354 N/A N/A N/A N/A N/A N/A N/A N/A 11.066±0.00 N/A N/A 23.823±0.00 N/A N/A
ENST00000617871 39.134±0.00 79.430±0.00 22.888±0.00 45.146±20.21 43.234±5.58 130.316±55.61 16.812±10.62 110.924±0.00 32.856±19.93 89.418±37.99 5.929±1.31 133.821±114.99 51.464±9.16 38.576±27.51

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002576 TAS platelet degranulation
GO:0005178 IEA integrin binding
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005886 TAS plasma membrane
GO:0005887 NAS integral component of plasma membrane
GO:0005925 IDA focal adhesion
GO:0006928 IDA cellular component movement
GO:0007155 IDA cell adhesion
GO:0007338 TAS single fertilization
GO:0007342 IDA fusion of sperm to egg plasma membrane
GO:0007420 IEA brain development
GO:0007596 TAS blood coagulation
GO:0008285 IEA negative regulation of cell proliferation
GO:0009414 IEA response to water deprivation
GO:0009897 IEA external side of plasma membrane
GO:0009986 IEA cell surface
GO:0014003 IEA oligodendrocyte development
GO:0016021 IEA integral component of membrane
GO:0016324 IEA apical plasma membrane
GO:0030168 NAS platelet activation
GO:0030913 ISS paranodal junction assembly
GO:0031092 TAS platelet alpha granule membrane
GO:0031982 IDA vesicle
GO:0032504 TAS multicellular organism reproduction
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005842 cd9a CD9 antigen (p24) a protein_coding Danio_rerio
ENSDARG00000016691 cd9b CD9 antigen, b protein_coding Danio_rerio
ENSMUSG00000030342 Cd9 CD9 antigen protein_coding Mus_musculus

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