C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CD9 antigen
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030342 Cd9 10090 - 6:125460266-125494791 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032492 Cd9-001 125460266-125494791 protein_coding
  ENSMUST00000130132 Cd9-002 125460589-125478302 processed_transcript
  ENSMUST00000140024 Cd9-003 125462116-125463024 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032492ENSMUST00000140024
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032492 97.111±36.88 64.831±5.08 405.934±78.30 16.851±6.16 144.013±17.80 308.144±27.25 45.607±8.74 83.199±5.78 67.012±71.51 359.108±11.12 14.245±1.77 117.309±35.26 238.647±74.00 5.605±2.74
ENSMUST00000140024 N/A N/A N/A 5.157±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.242±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006C4 CIL_0006C4_0002 CGP 6:125460266-125686679

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005178 IEA integrin binding
GO:0005515 IPI protein binding
GO:0005615 IEA extracellular space
GO:0005886 TAS plasma membrane
GO:0005925 IEA focal adhesion
GO:0006928 ISS cellular component movement
GO:0007155 ISS cell adhesion
GO:0007342 IDA fusion of sperm to egg plasma membrane
GO:0007420 IEA brain development
GO:0008285 IDA negative regulation of cell proliferation
GO:0009414 IEA response to water deprivation
GO:0009897 IDA external side of plasma membrane
GO:0009986 IEA cell surface
GO:0014003 IEA oligodendrocyte development
GO:0016021 IEA integral component of membrane
GO:0016324 IEA apical plasma membrane
GO:0030913 IDA paranodal junction assembly
GO:0031982 IEA vesicle
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005842 cd9a CD9 antigen (p24) a protein_coding Danio_rerio
ENSDARG00000016691 cd9b CD9 antigen, b protein_coding Danio_rerio
ENSG00000010278 CD9 CD9 molecule protein_coding Homo_sapiens

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