C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CD9 molecule
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000009180 CD9-001 ENSG00000010278 9606 + 12:6200449-6238259 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLungMuscleOvaryPlacentaENST00000009180
Transcript ID Kidney Lung Muscle Ovary Placenta
ENST00000009180 9.119±0.00 23.286±0.00 3.198±1.37 50.047±28.08 14.304±5.62

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002576 TAS platelet degranulation
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005886 TAS plasma membrane
GO:0005887 NAS integral component of plasma membrane
GO:0005925 IDA focal adhesion
GO:0006928 IDA cellular component movement
GO:0007155 IDA cell adhesion
GO:0007338 TAS single fertilization
GO:0007342 IDA fusion of sperm to egg plasma membrane
GO:0007596 TAS blood coagulation
GO:0016021 IEA integral component of membrane
GO:0030168 NAS platelet activation
GO:0030913 ISS paranodal junction assembly
GO:0031092 TAS platelet alpha granule membrane
GO:0031982 IDA vesicle
GO:0032504 TAS multicellular organism reproduction
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032492 Cd9-001 protein_coding Mus_musculus 0 734
ENSMUST00000130132 Cd9-002 processed_transcript Mus_musculus 0 625
ENSMUST00000174687 Cd9-ps-001 processed_pseudogene Mus_musculus 0 475
ENSMUST00000028646 Tspan18-002 protein_coding Mus_musculus 0.00008 53
ENSMUST00000111265 Tspan18-001 protein_coding Mus_musculus 0.00008 53

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