C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: CD9 molecule
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000617871 CD9-202 ENSG00000010278 9606 + 12:6200389-6238261 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000617871
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000617871 39.134±0.00 79.430±0.00 22.888±0.00 45.146±20.21 43.234±5.58 130.316±55.61 16.812±10.62 110.924±0.00 32.856±19.93 89.418±37.99 5.929±1.31 133.821±114.99 51.464±9.16 38.576±27.51

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032492 Cd9-001 protein_coding Mus_musculus 0 721
ENSMUST00000130132 Cd9-002 processed_transcript Mus_musculus 0 612
ENSMUST00000174687 Cd9-ps-001 processed_pseudogene Mus_musculus 0 479
ENSMUST00000028646 Tspan18-002 protein_coding Mus_musculus 0.00008 53
ENSMUST00000111265 Tspan18-001 protein_coding Mus_musculus 0.00008 53

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