C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: gamma-aminobutyric acid (GABA) A receptor, alpha 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000011677 GABRA3 9606 - X:152166234-152451358 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000370314 GABRA3-001 152166234-152451358 protein_coding
  ENST00000417858 GABRA3-004 152251058-152255998 processed_transcript
  ENST00000497894 GABRA3-003 152187209-152189943 processed_transcript
  ENST00000535043 GABRA3-005 152168228-152389497 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartOvaryPlacentaTestisENST00000370314ENST00000417858ENST00000535043
Transcript ID Adipose Adrenal Brain Breast Colon Heart Ovary Placenta Testis
ENST00000370314 N/A 0.004±0.00 7.056±0.17 0.015±0.00 0.042±0.00 N/A 0.014±0.01 1.069±0.16 0.574±0.00
ENST00000417858 N/A N/A N/A N/A 0.189±0.00 N/A N/A N/A N/A
ENST00000535043 0.034±0.00 N/A N/A N/A N/A 0.048±0.00 N/A 0.505±0.00 0.212±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000115 CIL_000115_0001 CGP X:152166234-152657534

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004890 IEA GABA-A receptor activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005254 IEA chloride channel activity
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006810 TAS:IEA transport
GO:0006811 IEA ion transport
GO:0007214 IEA gamma-aminobutyric acid signaling pathway
GO:0007268 TAS synaptic transmission
GO:0008503 TAS benzodiazepine receptor activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0034220 TAS ion transmembrane transport
GO:0034707 IEA chloride channel complex
GO:0045211 IEA postsynaptic membrane
GO:0055085 TAS transmembrane transport
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090883 gabra3 gamma-aminobutyric acid (GABA) A receptor, alpha 3 protein_coding Danio_rerio
ENSMUSG00000031343 Gabra3 gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3 protein_coding Mus_musculus

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