C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 45, member 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000079020 Slc45a4 10090 - 15:73577424-73645762 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000054266 Slc45a4-201 73580293-73624744 protein_coding
  ENSMUST00000076224 Slc45a4-002 73580290-73617324 protein_coding
  ENSMUST00000130765 Slc45a4-005 73605593-73645762 protein_coding
  ENSMUST00000132607 Slc45a4-003 73581557-73596529 protein_coding
  ENSMUST00000144936 Slc45a4-004 73580290-73605467 protein_coding
  ENSMUST00000150409 Slc45a4-006 73605948-73645345 processed_transcript
  ENSMUST00000151288 Slc45a4-001 73577424-73624744 protein_coding
  ENSMUST00000152558 Slc45a4-007 73586894-73588962 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076224ENSMUST00000130765ENSMUST00000132607ENSMUST00000144936ENSMUST00000151288
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076224 8.920±1.04 9.786±2.76 8.859±0.16 4.336±0.23 8.218±2.07 8.276±0.94 4.329±0.48 9.765±0.70 2.632±0.92 9.674±0.62 4.905±1.77 12.755±3.21 28.111±24.11 11.686±4.47
ENSMUST00000130765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 52.306±4.83 23.120±0.00
ENSMUST00000132607 3.364±0.67 17.230±1.64 N/A 2.509±0.52 9.300±1.74 6.156±1.26 2.269±0.28 N/A 1.254±0.79 8.765±1.99 N/A 16.637±2.44 N/A 9.946±1.68
ENSMUST00000144936 1.959±0.11 7.586±1.87 N/A N/A N/A 2.559±0.55 1.696±0.00 3.615±1.15 1.231±0.64 N/A 2.013±0.42 4.605±0.07 N/A N/A
ENSMUST00000151288 1.479±0.47 3.452±0.12 N/A N/A 1.543±0.20 1.760±0.23 1.283±0.00 2.338±0.05 0.336±0.08 2.185±0.34 0.670±0.06 3.322±0.39 N/A 1.912±0.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WG CIL_0007WG_0002 VISTA 15:73439611-74047146
CIL_0000X9 CIL_0000X9_0003 CGP 15:73512560-73645762
CIL_0006FO CIL_0006FO_0003 CGP 15:73577424-73707505

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0006810 IEA transport
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021820 SLC45A4 (1 of 2) solute carrier family 45, member 4 protein_coding Danio_rerio
ENSDARG00000077326 slc45a4 solute carrier family 45, member 4 protein_coding Danio_rerio
ENSG00000022567 SLC45A4 solute carrier family 45, member 4 protein_coding Homo_sapiens

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