C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: capping protein (actin filament), gelsolin-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409275 CAPG-012 ENSG00000042493 9606 - 2:85399146-85418432 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastOvaryENST00000409275
Transcript ID Brain Breast Ovary
ENST00000409275 0.958±0.00 7.117±0.00 5.321±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AX CIL_0009AX_0001 VISTA 2:84977509-85579132

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005634 IDA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000126101 Capg-009 protein_coding Mus_musculus 0 843
ENSMUST00000114071 Capg-001 protein_coding Mus_musculus 0 843
ENSMUST00000114072 Capg-002 protein_coding Mus_musculus 0 843
ENSMUST00000071044 Capg-003 protein_coding Mus_musculus 0 843
ENSMUST00000126124 Capg-006 protein_coding Mus_musculus 0 745
ENSMUST00000155188 Capg-005 protein_coding Mus_musculus 0 651
ENSMUST00000120648 5730416F02Rik-001 processed_pseudogene Mus_musculus 0 542
ENSMUST00000137435 Capg-011 retained_intron Mus_musculus 0 479
ENSMUST00000127770 Capg-012 retained_intron Mus_musculus 0 394
ENSMUST00000155705 Capg-007 protein_coding Mus_musculus 0 394
ENSMUST00000134809 Capg-008 protein_coding Mus_musculus 0 339

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