C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: golgi-associated PDZ and coiled-coil motif containing
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000047932 GOPC 9606 - 6:117318211-117602542 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000052569 GOPC-001 117560269-117602528 protein_coding
  ENST00000368498 GOPC-002 117560269-117602364 protein_coding
  ENST00000467125 GOPC-003 117318211-117573571 processed_transcript
  ENST00000535237 GOPC-201 117560272-117602542 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000052569ENST00000368498ENST00000467125
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000052569 4.299±0.00 3.464±0.00 3.654±0.00 2.113±0.00 3.612±0.04 5.031±1.75 1.114±0.14 2.020±0.45 4.989±1.87 6.819±0.00 N/A 8.545±2.16 5.453±1.54 9.808±2.21
ENST00000368498 N/A N/A N/A 7.136±1.11 2.636±0.66 2.268±0.00 3.403±1.24 4.006±2.35 2.164±0.00 N/A 1.866±1.21 2.519±0.19 N/A 2.056±0.00
ENST00000467125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.693±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005XO CIL_0005XO_0001 CGP 6:117265558-117425855
CIL_0001EK CIL_0001EK_0002 CGP 6:117318211-117602542

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005083 IEA small GTPase regulator activity
GO:0005109 IEA frizzled binding
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005886 NAS plasma membrane
GO:0006888 NAS ER to Golgi vesicle-mediated transport
GO:0006893 NAS Golgi to plasma membrane transport
GO:0007289 IEA spermatid nucleus differentiation
GO:0008022 IEA protein C-terminus binding
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0030054 IEA cell junction
GO:0030140 NAS trans-Golgi network transport vesicle
GO:0042803 IEA protein homodimerization activity
GO:0042995 IEA cell projection
GO:0043004 NAS cytoplasmic sequestering of CFTR protein
GO:0043234 IDA protein complex
GO:0044325 IPI ion channel binding
GO:0045176 NAS apical protein localization
GO:0045202 IEA synapse
GO:0045211 IEA postsynaptic membrane
GO:0050790 IEA regulation of catalytic activity
GO:0051260 IPI protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000023117 gopc golgi associated PDZ and coiled-coil motif containing protein_coding Danio_rerio
ENSMUSG00000019861 Gopc golgi associated PDZ and coiled-coil motif containing protein_coding Mus_musculus

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