C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005XO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000170162-ENSG00000047936 CGP 9606 6:117265558-117425855
GeneTranscriptPositionBiotype
ENSG00000047932 (GOPC)
golgi-associated PDZ and coiled-coil motif containing 		ENST00000052569 (GOPC-001) 117560269-117602528 protein_coding
ENST00000368498 (GOPC-002) 117560269-117602364 protein_coding
ENST00000467125 (GOPC-003) 117318211-117573571 processed_transcript
ENST00000535237 (GOPC-201) 117560272-117602542 protein_coding
ENSG00000170162 (VGLL2)
vestigial-like family member 2 		ENST00000326274 (VGLL2-002) 117265574-117273562 protein_coding
ENST00000352536 (VGLL2-001) 117265558-117273565 protein_coding
ENSG00000222713 (RN7SKP51)
RNA, 7SK small nuclear pseudogene 51 		ENST00000410781 (RN7SKP51-201) 117301455-117301758 misc_RNA
ENSG00000251814 (RN7SKP18)
RNA, 7SK small nuclear pseudogene 18 		ENST00000516005 (RN7SKP18-201) 117299364-117299638 misc_RNA
CIL_0005XO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000049641-ENSMUSG00000019893 CGP 10090 10:52022502-52195244
GeneTranscriptPositionBiotype
ENSMUSG00000019893 (Ros1)
Ros1 proto-oncogene 		ENSMUST00000020045 (Ros1-001) 52045926-52195244 protein_coding
ENSMUST00000117992 (Ros1-002) 52046016-52194956 protein_coding
ENSMUST00000175892 (Ros1-003) 52046016-52194956 nonsense_mediated_decay
ENSMUST00000177378 (Ros1-004) 52045721-52194956 nonsense_mediated_decay
ENSMUSG00000049641 (Vgll2)
vestigial like 2 homolog (Drosophila) 		ENSMUST00000058347 (Vgll2-002) 52022528-52028343 protein_coding
ENSMUST00000163017 (Vgll2-001) 52022502-52028471 protein_coding
ENSMUSG00000092914 (Gm24084)
predicted gene, 24084 		ENSMUST00000175173 (Gm24084-201) 52032251-52032387 miRNA
ENSMUSG00000093427 (Gm18513)
predicted gene, 18513 		ENSMUST00000177313 (Gm18513-001) 52189248-52189807 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005XO_0001ENSG00000047932ENST00000052569ENST00000368498ENST00000467125ENST00000535237ENSG00000170162ENST00000326274ENST00000352536ENSG00000222713ENST00000410781ENSG00000251814ENST00000516005CIL_0005XO_0002ENSMUSG00000019893ENSMUST00000020045ENSMUST00000117992ENSMUST00000175892ENSMUST00000177378ENSMUSG00000049641ENSMUST00000058347ENSMUST00000163017ENSMUSG00000092914ENSMUST00000175173ENSMUSG00000093427ENSMUST00000177313
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005XO_0001ENSG00000047932ENST00000052569ENST00000368498ENST00000467125ENSG00000170162ENST00000326274ENST00000352536ENSG00000222713ENST00000410781ENSG00000251814ENST00000516005CIL_0005XO_0002ENSMUSG00000019893ENSMUST00000020045ENSMUST00000117992ENSMUST00000175892ENSMUST00000177378ENSMUSG00000049641ENSMUST00000058347ENSMUST00000163017ENSMUSG00000092914ENSMUST00000175173ENSMUSG00000093427ENSMUST00000177313
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000047932 ENST00000052569 4.299±0.00 3.464±0.00 3.654±0.00 2.113±0.00 3.612±0.04 5.031±1.75 1.114±0.14 2.020±0.45 4.989±1.87 6.819±0.00 N/A 8.545±2.16 5.453±1.54 9.808±2.21
ENST00000368498 N/A N/A N/A 7.136±1.11 2.636±0.66 2.268±0.00 3.403±1.24 4.006±2.35 2.164±0.00 N/A 1.866±1.21 2.519±0.19 N/A 2.056±0.00
ENST00000467125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.693±0.00
ENST00000535237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000170162 ENST00000326274 N/A N/A N/A N/A 0.979±0.00 N/A 0.759±0.00 N/A N/A N/A 35.243±0.00 0.007±0.00 N/A 0.188±0.02
ENST00000352536 0.008±0.00 N/A N/A 0.096±0.00 N/A N/A 0.090±0.00 N/A N/A N/A 14.970±0.00 0.007±0.00 0.175±0.05 0.497±0.26
ENSG00000222713 ENST00000410781 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.198±0.00 N/A N/A N/A 0.176±0.00
ENSG00000251814 ENST00000516005 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.276±0.00 7.700±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000019893 ENSMUST00000020045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 0.065±0.00
ENSMUST00000117992 0.049±0.00 N/A 0.002±0.00 N/A N/A N/A N/A 0.085±0.00 0.016±0.01 0.144±0.02 0.029±0.02 0.011±0.00 N/A 0.079±0.05
ENSMUST00000175892 N/A N/A N/A N/A N/A 0.029±0.00 N/A 0.056±0.00 0.002±0.00 0.014±0.00 0.039±0.03 0.011±0.00 0.006±0.00 0.081±0.00
ENSMUST00000177378 0.004±0.00 N/A N/A N/A N/A N/A N/A N/A 0.008±0.00 N/A 0.018±0.00 N/A 0.006±0.00 0.077±0.00
ENSMUSG00000049641 ENSMUST00000058347 N/A 0.014±0.00 0.032±0.00 0.377±0.15 1.267±1.52 N/A 0.049±0.02 0.205±0.08 0.127±0.18 0.052±0.00 7.334±2.24 0.050±0.02 0.055±0.01 0.418±0.64
ENSMUST00000163017 N/A 0.014±0.00 N/A 0.615±0.35 0.381±0.00 N/A N/A 0.368±0.06 0.247±0.19 N/A 15.136±4.67 N/A 0.033±0.00 2.224±2.19
ENSMUSG00000092914 ENSMUST00000175173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.430±0.00 N/A N/A N/A
ENSMUSG00000093427 ENSMUST00000177313 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.140±0.05 N/A N/A N/A N/A

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