C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: golgi-associated PDZ and coiled-coil motif containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000467125 GOPC-003 ENSG00000047932 9606 - 6:117318211-117573571 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000467125
Transcript ID Testis
ENST00000467125 9.693±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005XO CIL_0005XO_0001 CGP 6:117265558-117425855
CIL_0001EK CIL_0001EK_0002 CGP 6:117318211-117602542

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020008 Gopc-201 protein_coding Mus_musculus 0 651
ENSMUST00000105475 Gopc-202 protein_coding Mus_musculus 0 651
ENSMUST00000175892 Ros1-003 nonsense_mediated_decay Mus_musculus 0 263
ENSMUST00000117992 Ros1-002 protein_coding Mus_musculus 0 263
ENSMUST00000020045 Ros1-001 protein_coding Mus_musculus 0 263
ENSMUST00000177378 Ros1-004 nonsense_mediated_decay Mus_musculus 0 263

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