C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Yip1 domain family, member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000058799 YIPF1 9606 - 1:53851719-53889834 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000072644 YIPF1-201 53851720-53889814 protein_coding
  ENST00000371399 YIPF1-002 53851733-53889779 protein_coding
  ENST00000412288 YIPF1-003 53866755-53889834 protein_coding
  ENST00000464950 YIPF1-001 53851719-53889733 nonsense_mediated_decay
  ENST00000465897 YIPF1-006 53866804-53889780 processed_transcript
  ENST00000469457 YIPF1-004 53866195-53889780 processed_transcript
  ENST00000472983 YIPF1-007 53878322-53889789 processed_transcript
  ENST00000480151 YIPF1-005 53866201-53889798 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000072644ENST00000371399ENST00000412288ENST00000464950ENST00000465897ENST00000469457ENST00000472983
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000072644 N/A 1.338±0.00 1.676±0.23 0.970±0.00 N/A 0.664±0.55 2.269±0.00 N/A 4.712±0.00 N/A 1.614±0.79 3.629±1.12 2.591±0.83
ENST00000371399 1.352±0.00 1.949±0.00 N/A N/A N/A 2.765±0.00 14.637±0.00 N/A 3.178±0.00 5.618±0.00 4.309±0.00 2.913±1.09 1.869±0.05
ENST00000412288 N/A N/A 1.005±0.00 1.916±0.87 0.896±0.00 0.795±0.00 N/A 0.902±0.00 0.826±0.00 N/A N/A N/A N/A
ENST00000464950 N/A 4.441±0.00 1.698±0.36 N/A 2.538±0.00 2.043±0.00 3.380±0.00 12.210±0.00 2.668±0.00 N/A 4.563±2.36 12.122±6.18 4.235±2.83
ENST00000465897 N/A N/A N/A N/A N/A 0.136±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000469457 N/A N/A N/A N/A 1.184±0.00 N/A N/A N/A N/A N/A 1.330±0.00 4.340±0.00 2.802±0.00
ENST00000472983 N/A N/A N/A N/A 0.822±0.00 N/A N/A N/A N/A 0.584±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0004540 IEA ribonuclease activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030133 IDA transport vesicle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014474 yipf1 Yip1 domain family, member 1 protein_coding Danio_rerio
ENSMUSG00000057375 Yipf1 Yip1 domain family, member 1 protein_coding Mus_musculus

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