C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Yip1 domain family, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000072644 YIPF1-201 ENSG00000058799 9606 - 1:53851720-53889814 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartKidneyLungOvaryPlacentaTestisENST00000072644
Transcript ID Adrenal Brain Breast Heart Kidney Lung Ovary Placenta Testis
ENST00000072644 1.338±0.00 1.676±0.23 0.970±0.00 0.664±0.55 2.269±0.00 4.712±0.00 1.614±0.79 3.629±1.12 2.591±0.83

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0004540 IEA ribonuclease activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030133 IDA transport vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075693 Yipf1-001 protein_coding Mus_musculus 0 917
ENSMUST00000139527 Yipf1-004 protein_coding Mus_musculus 0 701
ENSMUST00000128284 Yipf1-009 protein_coding Mus_musculus 0 590
ENSMUST00000146829 Yipf1-011 processed_transcript Mus_musculus 0 542
ENSMUST00000137391 Yipf1-003 processed_transcript Mus_musculus 0 477
ENSMUST00000143106 Yipf1-010 processed_transcript Mus_musculus 0 339

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