C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: aldehyde dehydrogenase 18 family, member A1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000059573 ALDH18A1 9606 - 10:95605929-95656706 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000371221 ALDH18A1-002 95605945-95656706 protein_coding
  ENST00000371224 ALDH18A1-001 95605929-95656706 protein_coding
  ENST00000483788 ALDH18A1-004 95637093-95656609 processed_transcript
  ENST00000485428 ALDH18A1-005 95611256-95616697 processed_transcript
  ENST00000489386 ALDH18A1-003 95625430-95628853 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371221ENST00000371224ENST00000483788ENST00000489386
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371221 1.614±0.00 1.265±0.00 N/A N/A 0.921±0.00 5.536±0.00 0.387±0.00 5.455±0.00 1.824±0.00 N/A 1.117±0.00 7.822±2.66 3.724±0.45 2.304±0.00
ENST00000371224 5.638±0.00 5.148±0.00 0.804±0.00 3.923±0.00 6.881±2.98 6.722±0.00 1.373±0.70 5.415±3.77 4.436±1.09 4.494±2.14 1.016±0.00 17.228±6.02 17.823±4.05 6.630±2.34
ENST00000483788 N/A N/A N/A N/A N/A N/A N/A 1.947±0.00 N/A N/A N/A N/A N/A N/A
ENST00000489386 N/A N/A N/A N/A N/A N/A 1.093±0.00 N/A N/A N/A N/A 60.642±0.00 32.004±0.00 12.258±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095J CIL_00095J_0001 VISTA 10:95113366-95716533
CIL_0007T2 CIL_0007T2_0001 VISTA 10:95207959-95809585
CIL_00067I CIL_00067I_0001 CGP 10:95311771-95656706
CIL_00067D CIL_00067D_0001 CGP 10:95605929-95694143

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004349 IDA:IEA glutamate 5-kinase activity
GO:0004350 IDA:IEA glutamate-5-semialdehyde dehydrogenase activity
GO:0005524 IEA ATP binding
GO:0005737 IDA:IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0006536 IMP glutamate metabolic process
GO:0006561 IMP:IEA proline biosynthetic process
GO:0006592 IMP ornithine biosynthetic process
GO:0008152 IEA metabolic process
GO:0008652 TAS cellular amino acid biosynthetic process
GO:0016310 IEA phosphorylation
GO:0016491 IEA oxidoreductase activity
GO:0019240 IMP citrulline biosynthetic process
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0055114 IEA oxidation-reduction process
GO:0055129 IEA L-proline biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061123 aldh18a1 aldehyde dehydrogenase 18 family, member A1 protein_coding Danio_rerio
ENSMUSG00000025007 Aldh18a1 aldehyde dehydrogenase 18 family, member A1 protein_coding Mus_musculus

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