C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00067D_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000059573-ENSG00000119977 CGP 9606 10:95605929-95694143
GeneTranscriptPositionBiotype
ENSG00000059573 (ALDH18A1)
aldehyde dehydrogenase 18 family, member A1 		ENST00000371221 (ALDH18A1-002) 95605945-95656706 protein_coding
ENST00000371224 (ALDH18A1-001) 95605929-95656706 protein_coding
ENST00000483788 (ALDH18A1-004) 95637093-95656609 processed_transcript
ENST00000485428 (ALDH18A1-005) 95611256-95616697 processed_transcript
ENST00000489386 (ALDH18A1-003) 95625430-95628853 processed_transcript
ENSG00000119977 (TCTN3)
tectonic family member 3 		ENST00000265993 (TCTN3-001) 95663401-95694143 protein_coding
ENST00000371209 (TCTN3-007) 95683261-95693899 protein_coding
ENST00000371217 (TCTN3-009) 95663401-95693923 protein_coding
ENST00000430368 (TCTN3-010) 95663696-95693926 protein_coding
ENST00000478245 (TCTN3-006) 95692864-95693901 retained_intron
ENST00000497399 (TCTN3-005) 95687082-95693955 retained_intron
ENST00000614499 (TCTN3-201) 95663396-95694143 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_00067D_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025007-ENSMUSG00000025008 CGP 10090 19:40550257-40612233
GeneTranscriptPositionBiotype
ENSMUSG00000025007 (Aldh18a1)
aldehyde dehydrogenase 18 family, member A1 		ENSMUST00000025979 (Aldh18a1-001) 40550257-40588463 protein_coding
ENSMUST00000134749 (Aldh18a1-002) 40557057-40588423 retained_intron
ENSMUST00000149476 (Aldh18a1-003) 40577615-40588410 protein_coding
ENSMUST00000155613 (Aldh18a1-004) 40551151-40554863 retained_intron
ENSMUST00000175932 (Aldh18a1-005) 40577658-40588382 protein_coding
ENSMUST00000175967 (Aldh18a1-008) 40553427-40554741 protein_coding
ENSMUST00000176939 (Aldh18a1-007) 40550257-40588369 protein_coding
ENSMUST00000176955 (Aldh18a1-006) 40574344-40588384 protein_coding
ENSMUSG00000025008 (Tctn3)
tectonic family member 3 		ENSMUST00000025981 (Tctn3-001) 40596446-40612233 protein_coding
ENSMUST00000132452 (Tctn3-003) 40607125-40612200 protein_coding
ENSMUST00000135795 (Tctn3-002) 40605098-40612203 protein_coding
ENSMUST00000144566 (Tctn3-005) 40611125-40612188 retained_intron
ENSMUSG00000096592 (Gm15801)
predicted gene 15801 		ENSMUST00000120920 (Gm15801-001) 40560537-40561058 processed_pseudogene
ENSMUSG00000097792 (Gm27042)
predicted gene, 27042 		ENSMUST00000181109 (Gm27042-201) 40589435-40594862 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00067D_0001ENSG00000059573ENST00000371221ENST00000371224ENST00000483788ENST00000485428ENST00000489386ENSG00000119977ENST00000265993ENST00000371209ENST00000371217ENST00000430368ENST00000478245ENST00000497399ENST00000614499CIL_00067D_0002ENSMUSG00000025007ENSMUST00000025979ENSMUST00000134749ENSMUST00000149476ENSMUST00000155613ENSMUST00000175932ENSMUST00000175967ENSMUST00000176939ENSMUST00000176955ENSMUSG00000025008ENSMUST00000025981ENSMUST00000132452ENSMUST00000135795ENSMUST00000144566ENSMUSG00000096592ENSMUST00000120920ENSMUSG00000097792ENSMUST00000181109
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00067D_0001ENSG00000059573ENST00000371221ENST00000371224ENST00000483788ENST00000489386ENSG00000119977ENST00000265993ENST00000371209ENST00000371217ENST00000430368ENST00000478245CIL_00067D_0002ENSMUSG00000025007ENSMUST00000025979ENSMUST00000134749ENSMUST00000149476ENSMUST00000155613ENSMUST00000176939ENSMUSG00000025008ENSMUST00000025981ENSMUST00000132452ENSMUST00000135795ENSMUST00000144566ENSMUSG00000096592ENSMUST00000120920ENSMUSG00000097792ENSMUST00000181109
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000059573 ENST00000371221 1.614±0.00 1.265±0.00 N/A N/A 0.921±0.00 5.536±0.00 0.387±0.00 5.455±0.00 1.824±0.00 N/A 1.117±0.00 7.822±2.66 3.724±0.45 2.304±0.00
ENST00000371224 5.638±0.00 5.148±0.00 0.804±0.00 3.923±0.00 6.881±2.98 6.722±0.00 1.373±0.70 5.415±3.77 4.436±1.09 4.494±2.14 1.016±0.00 17.228±6.02 17.823±4.05 6.630±2.34
ENST00000483788 N/A N/A N/A N/A N/A N/A N/A 1.947±0.00 N/A N/A N/A N/A N/A N/A
ENST00000485428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489386 N/A N/A N/A N/A N/A N/A 1.093±0.00 N/A N/A N/A N/A 60.642±0.00 32.004±0.00 12.258±0.00
ENSG00000119977 ENST00000265993 N/A 1.341±0.00 N/A N/A N/A N/A 0.429±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000371209 N/A N/A 0.853±0.00 N/A N/A N/A N/A N/A 1.606±0.00 N/A N/A N/A N/A N/A
ENST00000371217 7.037±0.00 8.878±0.00 0.851±0.00 3.365±2.21 4.966±4.39 3.896±2.87 1.527±1.37 10.195±6.36 4.385±3.90 5.257±4.04 1.821±1.43 11.977±7.96 20.121±4.67 11.669±2.02
ENST00000430368 N/A N/A N/A N/A 0.788±0.00 N/A 0.571±0.00 N/A 0.303±0.00 N/A 0.764±0.12 3.552±0.00 4.632±0.00 3.423±0.00
ENST00000478245 N/A N/A N/A 2.161±0.00 N/A N/A N/A N/A N/A N/A 2.244±0.00 N/A N/A N/A
ENST00000497399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025007 ENSMUST00000025979 9.605±7.16 3.552±1.51 18.713±2.89 19.149±0.59 3.909±1.34 3.927±1.62 2.383±0.61 0.842±0.48 12.057±6.65 3.407±0.36 0.822±0.26 13.076±3.29 18.368±11.72 1.116±0.63
ENSMUST00000134749 N/A 2.882±0.26 N/A 1.096±0.00 1.529±0.00 2.252±0.00 N/A 0.414±0.11 0.203±0.00 N/A N/A 7.143±0.99 N/A N/A
ENSMUST00000149476 N/A 5.648±1.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155613 N/A N/A N/A N/A N/A N/A N/A N/A 0.364±0.00 N/A N/A N/A N/A N/A
ENSMUST00000175932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000175967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176939 4.029±2.89 3.043±1.75 7.333±3.28 4.475±2.14 4.179±1.08 10.223±0.42 1.177±0.43 1.234±0.50 2.569±2.68 1.377±0.38 0.597±0.35 13.958±5.73 7.902±3.11 0.740±0.38
ENSMUST00000176955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000025008 ENSMUST00000025981 4.181±1.03 3.751±1.42 3.925±0.77 5.780±1.11 2.424±1.20 2.437±0.37 1.731±0.41 3.171±0.71 0.814±0.53 3.703±0.87 0.786±0.25 9.820±1.53 3.857±1.07 7.360±4.01
ENSMUST00000132452 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.405±0.00 N/A N/A N/A
ENSMUST00000135795 N/A N/A N/A N/A 2.459±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144566 N/A N/A N/A 3.297±0.00 2.575±0.53 1.555±0.00 1.523±0.00 N/A 0.181±0.00 3.558±0.00 N/A 11.337±3.35 N/A 1.046±0.00
ENSMUSG00000096592 ENSMUST00000120920 N/A N/A N/A 1.127±0.00 N/A N/A N/A N/A 0.758±0.12 N/A N/A N/A N/A N/A
ENSMUSG00000097792 ENSMUST00000181109 0.342±0.00 0.763±0.39 1.292±0.11 2.311±1.38 1.077±0.45 0.605±0.13 0.608±0.06 0.634±0.00 0.415±0.29 1.517±0.11 0.178±0.06 3.334±0.83 0.874±0.14 2.049±0.81

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