C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aldehyde dehydrogenase 18 family, member A1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371224 ALDH18A1-001 ENSG00000059573 9606 - 10:95605929-95656706 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371224
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371224 5.638±0.00 5.148±0.00 0.804±0.00 3.923±0.00 6.881±2.98 6.722±0.00 1.373±0.70 5.415±3.77 4.436±1.09 4.494±2.14 1.016±0.00 17.228±6.02 17.823±4.05 6.630±2.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095J CIL_00095J_0001 VISTA 10:95113366-95716533
CIL_0007T2 CIL_0007T2_0001 VISTA 10:95207959-95809585
CIL_00067I CIL_00067I_0001 CGP 10:95311771-95656706
CIL_00067D CIL_00067D_0001 CGP 10:95605929-95694143

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004349 IDA glutamate 5-kinase activity
GO:0004350 IDA:IEA glutamate-5-semialdehyde dehydrogenase activity
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0006536 IMP glutamate metabolic process
GO:0006561 IMP:IEA proline biosynthetic process
GO:0006592 IMP ornithine biosynthetic process
GO:0008152 IEA metabolic process
GO:0008652 TAS cellular amino acid biosynthetic process
GO:0016310 IEA phosphorylation
GO:0016491 IEA oxidoreductase activity
GO:0019240 IMP citrulline biosynthetic process
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0055114 IEA oxidation-reduction process
GO:0055129 IEA L-proline biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025979 Aldh18a1-001 protein_coding Mus_musculus 0 2830
ENSMUST00000176939 Aldh18a1-007 protein_coding Mus_musculus 0 2796
ENSMUST00000134749 Aldh18a1-002 retained_intron Mus_musculus 0 2272
ENSMUST00000149476 Aldh18a1-003 protein_coding Mus_musculus 0 603
ENSMUST00000155613 Aldh18a1-004 retained_intron Mus_musculus 0 571
ENSMUST00000175932 Aldh18a1-005 protein_coding Mus_musculus 0 494
ENSMUST00000176955 Aldh18a1-006 protein_coding Mus_musculus 0 396

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