C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane 7 superfamily member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000064115 TM7SF3 9606 - 12:26973195-27014434 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000343028 TM7SF3-001 26973195-27014394 protein_coding
  ENST00000512808 TM7SF3-023 26996851-27013014 protein_coding
  ENST00000535260 TM7SF3-022 26975577-26995297 nonsense_mediated_decay
  ENST00000535423 TM7SF3-007 26996783-27014369 protein_coding
  ENST00000535819 TM7SF3-019 26980566-27014347 protein_coding
  ENST00000537406 TM7SF3-013 26975556-26980608 protein_coding
  ENST00000539399 TM7SF3-005 26999704-27014384 processed_transcript
  ENST00000539741 TM7SF3-016 26995301-27014374 protein_coding
  ENST00000541081 TM7SF3-010 26976330-26980271 retained_intron
  ENST00000542019 TM7SF3-021 26995240-27014373 nonsense_mediated_decay
  ENST00000542667 TM7SF3-015 26979902-27014211 processed_transcript
  ENST00000543088 TM7SF3-003 26995361-27014434 protein_coding
  ENST00000543655 TM7SF3-017 26980566-27003285 protein_coding
  ENST00000543803 TM7SF3-020 26995235-27014359 protein_coding
  ENST00000543882 TM7SF3-009 26976262-26996785 nonsense_mediated_decay
  ENST00000544179 TM7SF3-011 26974096-26975775 retained_intron
  ENST00000545303 TM7SF3-012 26975496-26995268 protein_coding
  ENST00000545344 TM7SF3-008 26974154-26990546 protein_coding
  ENST00000545600 TM7SF3-004 26999589-27014398 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000343028ENST00000543655ENST00000544179ENST00000545344
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000343028 3.595±0.00 5.041±0.00 2.845±0.00 4.415±1.03 5.455±3.45 4.760±2.73 2.324±1.07 9.271±0.00 3.750±2.33 6.213±0.02 0.829±0.48 14.475±6.63 9.972±4.08 7.173±0.09
ENST00000543655 N/A N/A N/A N/A 9.332±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.479±0.00 N/A N/A N/A
ENST00000545344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.165±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003NL CIL_0003NL_0002 CGP 12:26938383-27014434
CIL_0003NM CIL_0003NM_0002 CGP 12:26973195-27066343

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000093658 tm7sf3 transmembrane 7 superfamily member 3 protein_coding Danio_rerio
ENSMUSG00000040234 Tm7sf3 transmembrane 7 superfamily member 3 protein_coding Mus_musculus

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