C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003NL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000009657-ENSDARG00000093658 CGP 7955 4:1581954-1616515
GeneTranscriptPositionBiotype
ENSDARG00000009657 (fgfr1op2)
FGFR1 oncogene partner 2 		ENSDART00000021139 (fgfr1op2-001) 1581954-1589975 protein_coding
ENSDART00000144356 (fgfr1op2-002) 1581958-1584849 processed_transcript
ENSDARG00000093658 (tm7sf3)
transmembrane 7 superfamily member 3 		ENSDART00000136633 (tm7sf3-201) 1593845-1609986 protein_coding
ENSDART00000144074 (tm7sf3-001) 1591880-1616515 protein_coding
CIL_0003NL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000111790-ENSG00000064115 CGP 9606 12:26938383-27014434
GeneTranscriptPositionBiotype
ENSG00000064115 (TM7SF3)
transmembrane 7 superfamily member 3 		ENST00000343028 (TM7SF3-001) 26973195-27014394 protein_coding
ENST00000512808 (TM7SF3-023) 26996851-27013014 protein_coding
ENST00000535260 (TM7SF3-022) 26975577-26995297 nonsense_mediated_decay
ENST00000535423 (TM7SF3-007) 26996783-27014369 protein_coding
ENST00000535819 (TM7SF3-019) 26980566-27014347 protein_coding
ENST00000537406 (TM7SF3-013) 26975556-26980608 protein_coding
ENST00000539399 (TM7SF3-005) 26999704-27014384 processed_transcript
ENST00000539741 (TM7SF3-016) 26995301-27014374 protein_coding
ENST00000541081 (TM7SF3-010) 26976330-26980271 retained_intron
ENST00000542019 (TM7SF3-021) 26995240-27014373 nonsense_mediated_decay
ENST00000542667 (TM7SF3-015) 26979902-27014211 processed_transcript
ENST00000543088 (TM7SF3-003) 26995361-27014434 protein_coding
ENST00000543655 (TM7SF3-017) 26980566-27003285 protein_coding
ENST00000543803 (TM7SF3-020) 26995235-27014359 protein_coding
ENST00000543882 (TM7SF3-009) 26976262-26996785 nonsense_mediated_decay
ENST00000544179 (TM7SF3-011) 26974096-26975775 retained_intron
ENST00000545303 (TM7SF3-012) 26975496-26995268 protein_coding
ENST00000545344 (TM7SF3-008) 26974154-26990546 protein_coding
ENST00000545600 (TM7SF3-004) 26999589-27014398 protein_coding
ENSG00000111790 (FGFR1OP2)
FGFR1 oncogene partner 2 		ENST00000229395 (FGFR1OP2-001) 26938383-26966553 protein_coding
ENST00000327214 (FGFR1OP2-004) 26938500-26966650 protein_coding
ENST00000395941 (FGFR1OP2-006) 26938484-26957971 retained_intron
ENST00000538172 (FGFR1OP2-003) 26960996-26965080 retained_intron
ENST00000544111 (FGFR1OP2-005) 26938481-26956587 protein_coding
ENST00000546072 (FGFR1OP2-002) 26938497-26960846 protein_coding
ENSG00000247903 (RP11-421F16.3)
 ENST00000500632 (RP11-421F16.3-001) 26971586-26979582 antisense
CIL_0003NL_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040242-ENSMUSG00000040234 CGP 10090 6:146577203-146642824
GeneTranscriptPositionBiotype
ENSMUSG00000030291 (Med21)
mediator complex subunit 21 		ENSMUST00000032429 (Med21-001) 146642547-146650602 protein_coding
ENSMUST00000075077 (Med21-004) 146647160-146650602 retained_intron
ENSMUST00000111650 (Med21-005) 146642580-146649533 protein_coding
ENSMUST00000125539 (Med21-002) 146642547-146650602 processed_transcript
ENSMUST00000134387 (Med21-003) 146642581-146650602 processed_transcript
ENSMUSG00000040234 (Tm7sf3)
transmembrane 7 superfamily member 3 		ENSMUST00000037709 (Tm7sf3-001) 146602352-146634597 protein_coding
ENSMUST00000127529 (Tm7sf3-004) 146610891-146634498 nonsense_mediated_decay
ENSMUST00000138476 (Tm7sf3-003) 146619942-146642814 processed_transcript
ENSMUST00000147027 (Tm7sf3-002) 146621947-146642824 processed_transcript
ENSMUSG00000040242 (Fgfr1op2)
FGFR1 oncogene partner 2 		ENSMUST00000037836 (Fgfr1op2-005) 146577203-146592865 protein_coding
ENSMUST00000058245 (Fgfr1op2-004) 146577921-146592865 protein_coding
ENSMUST00000067404 (Fgfr1op2-001) 146577859-146599198 protein_coding
ENSMUST00000111663 (Fgfr1op2-002) 146577859-146599198 protein_coding
ENSMUST00000147862 (Fgfr1op2-003) 146577942-146587308 retained_intron
ENSMUST00000160697 (Fgfr1op2-006) 146588321-146597331 processed_transcript
ENSMUSG00000040250 (Asun)
asunder, spermatogenesis regulator 		ENSMUST00000032427 (Asun-001) 146549632-146577835 protein_coding
ENSMUST00000126996 (Asun-002) 146563182-146566501 retained_intron
ENSMUST00000131662 (Asun-003) 146555004-146576267 protein_coding
ENSMUST00000132963 (Asun-004) 146554082-146554812 retained_intron
ENSMUST00000135277 (Asun-007) 146552488-146556235 processed_transcript
ENSMUST00000139546 (Asun-005) 146550094-146554035 retained_intron
ENSMUST00000139979 (Asun-006) 146549632-146554635 protein_coding
ENSMUST00000152994 (Asun-008) 146549931-146550401 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003NL_0001ENSDARG00000009657ENSDART00000021139ENSDART00000144356ENSDARG00000093658ENSDART00000136633ENSDART00000144074CIL_0003NL_0002ENSG00000064115ENST00000343028ENST00000512808ENST00000535260ENST00000535423ENST00000535819ENST00000537406ENST00000539399ENST00000539741ENST00000541081ENST00000542019ENST00000542667ENST00000543088ENST00000543655ENST00000543803ENST00000543882ENST00000544179ENST00000545303ENST00000545344ENST00000545600ENSG00000111790ENST00000229395ENST00000327214ENST00000395941ENST00000538172ENST00000544111ENST00000546072ENSG00000247903ENST00000500632CIL_0003NL_0003ENSMUSG00000030291ENSMUST00000032429ENSMUST00000075077ENSMUST00000111650ENSMUST00000125539ENSMUST00000134387ENSMUSG00000040234ENSMUST00000037709ENSMUST00000127529ENSMUST00000138476ENSMUST00000147027ENSMUSG00000040242ENSMUST00000037836ENSMUST00000058245ENSMUST00000067404ENSMUST00000111663ENSMUST00000147862ENSMUST00000160697ENSMUSG00000040250ENSMUST00000032427ENSMUST00000126996ENSMUST00000131662ENSMUST00000132963ENSMUST00000135277ENSMUST00000139546ENSMUST00000139979ENSMUST00000152994
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003NL_0001ENSDARG00000009657ENSDART00000021139ENSDARG00000093658ENSDART00000136633ENSDART00000144074CIL_0003NL_0002ENSG00000064115ENST00000343028ENST00000543655ENST00000544179ENST00000545344ENSG00000111790ENST00000229395ENST00000327214ENST00000395941ENST00000538172ENST00000546072ENSG00000247903ENST00000500632CIL_0003NL_0003ENSMUSG00000030291ENSMUST00000032429ENSMUSG00000040234ENSMUST00000037709ENSMUSG00000040242ENSMUST00000037836ENSMUST00000058245ENSMUST00000067404ENSMUST00000111663ENSMUST00000160697ENSMUSG00000040250ENSMUST00000032427ENSMUST00000131662ENSMUST00000135277ENSMUST00000139979
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000009657 ENSDART00000021139 N/A N/A N/A 15.542±1.81 N/A N/A 22.726±4.26 17.494±2.43 4.118±0.00 N/A 5.793±0.00 N/A N/A N/A
ENSDART00000144356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000093658 ENSDART00000136633 N/A N/A N/A 1.895±0.87 N/A N/A 5.304±1.23 8.370±0.00 0.989±0.00 N/A N/A N/A N/A N/A
ENSDART00000144074 N/A N/A N/A 3.580±0.83 N/A N/A 3.509±0.55 7.954±1.46 1.106±0.00 N/A 2.913±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000064115 ENST00000343028 3.595±0.00 5.041±0.00 2.845±0.00 4.415±1.03 5.455±3.45 4.760±2.73 2.324±1.07 9.271±0.00 3.750±2.33 6.213±0.02 0.829±0.48 14.475±6.63 9.972±4.08 7.173±0.09
ENST00000512808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539741 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543088 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543655 N/A N/A N/A N/A 9.332±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.479±0.00 N/A N/A N/A
ENST00000545303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.165±0.00 N/A N/A N/A
ENST00000545600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000111790 ENST00000229395 1.937±0.00 3.766±0.00 N/A 2.486±0.14 2.338±0.28 2.313±0.00 1.596±0.87 3.271±1.95 2.006±0.55 4.136±1.06 1.572±0.02 4.712±0.64 1.863±0.61 4.169±0.16
ENST00000327214 2.335±0.00 3.356±0.00 2.386±0.00 14.798±3.10 2.873±1.42 3.972±0.40 0.870±0.01 3.105±0.68 2.408±1.53 4.793±1.10 2.948±0.00 4.840±1.68 0.864±0.01 4.841±0.62
ENST00000395941 N/A N/A 2.514±0.00 N/A 4.074±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538172 N/A 1.154±0.00 1.043±0.00 2.382±0.00 1.425±0.00 2.052±0.00 0.566±0.00 N/A 2.026±0.00 N/A N/A 1.985±0.11 0.523±0.00 2.526±0.00
ENST00000544111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546072 5.456±0.00 5.489±0.00 N/A N/A 5.943±0.00 5.248±1.71 3.558±2.24 4.780±2.97 1.852±0.00 N/A N/A 10.353±4.24 5.182±0.59 8.722±0.00
ENSG00000247903 ENST00000500632 1.190±0.00 2.846±0.00 1.962±0.00 3.063±0.00 2.297±0.57 1.565±0.91 0.953±0.00 3.687±0.00 1.086±0.00 1.932±0.49 0.600±0.00 1.853±0.13 N/A 3.132±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030291 ENSMUST00000032429 22.701±1.10 N/A 33.050±6.11 20.972±11.27 17.450±8.76 13.299±1.59 21.219±2.26 25.875±3.76 32.082±12.59 15.527±0.54 15.522±1.69 14.907±4.24 37.930±12.12 24.728±10.17
ENSMUST00000075077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000111650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000040234 ENSMUST00000037709 11.009±4.06 17.498±1.77 11.830±1.28 5.022±1.78 6.884±0.79 15.469±2.74 3.911±1.17 20.041±0.75 14.125±5.21 11.000±2.69 2.312±0.45 11.721±2.95 4.240±0.49 3.145±0.93
ENSMUST00000127529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000040242 ENSMUST00000037836 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.157±2.49 N/A
ENSMUST00000058245 17.133±2.32 81.361±10.86 N/A 52.181±0.00 29.237±10.50 28.462±2.32 7.216±1.74 9.480±2.47 9.718±1.09 20.183±7.26 N/A 35.886±13.91 55.594±30.74 123.632±54.93
ENSMUST00000067404 7.290±0.82 9.835±0.00 14.781±3.45 10.754±1.42 6.650±1.67 7.501±1.35 7.362±2.28 5.773±3.01 9.651±6.81 8.130±1.44 6.577±1.33 9.634±2.63 6.559±3.25 N/A
ENSMUST00000111663 4.088±1.29 N/A 11.720±0.75 5.021±0.66 4.825±1.90 N/A 2.564±0.20 2.721±0.58 7.660±4.21 7.675±1.71 9.502±0.51 4.591±2.60 7.979±1.89 11.383±1.42
ENSMUST00000147862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.812±5.48 98.000±0.00
ENSMUSG00000040250 ENSMUST00000032427 3.730±1.38 9.572±1.08 8.105±2.41 8.058±4.13 6.543±2.04 3.991±2.10 1.881±1.14 3.432±2.07 6.799±4.41 5.712±0.53 1.636±0.59 8.694±2.53 5.038±1.94 7.023±0.00
ENSMUST00000126996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131662 N/A N/A N/A N/A 4.937±0.00 N/A N/A 2.120±0.00 N/A N/A N/A 6.664±0.25 5.949±2.49 N/A
ENSMUST00000132963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135277 N/A N/A N/A 28.062±0.00 N/A N/A N/A N/A N/A N/A 2.471±0.00 39.614±26.91 33.761±25.94 183.913±0.00
ENSMUST00000139546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139979 N/A N/A 5.343±0.00 6.666±0.00 N/A N/A N/A N/A 6.804±0.73 N/A 2.516±0.00 12.092±2.85 9.704±5.34 28.562±0.00
ENSMUST00000152994 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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