C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane 7 superfamily member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000343028 TM7SF3-001 ENSG00000064115 9606 - 12:26973195-27014394 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000343028
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000343028 3.595±0.00 5.041±0.00 2.845±0.00 4.415±1.03 5.455±3.45 4.760±2.73 2.324±1.07 9.271±0.00 3.750±2.33 6.213±0.02 0.829±0.48 14.475±6.63 9.972±4.08 7.173±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003NL CIL_0003NL_0002 CGP 12:26938383-27014434
CIL_0003NM CIL_0003NM_0002 CGP 12:26973195-27066343

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037709 Tm7sf3-001 protein_coding Mus_musculus 0 1206
ENSMUST00000127529 Tm7sf3-004 nonsense_mediated_decay Mus_musculus 0 377
ENSMUST00000147027 Tm7sf3-002 processed_transcript Mus_musculus 0 241
ENSMUST00000138476 Tm7sf3-003 processed_transcript Mus_musculus 1e-26 126

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