C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DEAH (Asp-Glu-Ala-His) box polypeptide 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000067596 DHX8 9606 + 17:43483865-43544463 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262415 DHX8-001 43483966-43525670 protein_coding
  ENST00000540306 DHX8-002 43483963-43526786 protein_coding
  ENST00000587044 DHX8-003 43491194-43526796 retained_intron
  ENST00000587574 DHX8-004 43522152-43526803 protein_coding
  ENST00000589898 DHX8-006 43521396-43544463 protein_coding
  ENST00000592258 DHX8-005 43483865-43492292 nonsense_mediated_decay
  ENST00000605777 DHX8-007 43484140-43490493 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262415ENST00000540306
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262415 N/A 0.476±0.00 1.443±0.13 2.172±0.00 1.970±0.00 0.735±0.38 1.206±0.18 1.444±0.07 3.054±2.19 3.441±1.91 4.549±1.48 4.931±2.37 2.941±0.00
ENST00000540306 3.560±0.00 1.573±0.00 1.367±0.18 2.491±0.00 1.767±0.56 0.794±0.21 1.258±0.52 3.002±0.00 2.288±0.00 2.303±0.00 5.059±1.65 4.299±1.45 7.730±2.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000996 CIL_000996_0001 VISTA 17:43262867-43863532
CIL_00090X CIL_00090X_0001 VISTA 17:43291368-43892559
CIL_000997 CIL_000997_0001 VISTA 17:43327654-43928719
CIL_00047L CIL_00047L_0001 CGP 17:43398959-43544463
CIL_000495 CIL_000495_0001 CGP 17:43483865-43579620

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000398 IC mRNA splicing, via spliceosome
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0004004 TAS ATP-dependent RNA helicase activity
GO:0004386 IEA helicase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005681 TAS spliceosomal complex
GO:0006200 IEA ATP catabolic process
GO:0006396 TAS RNA processing
GO:0006810 IEA transport
GO:0008026 IEA ATP-dependent helicase activity
GO:0008380 TAS RNA splicing
GO:0042802 IPI identical protein binding
GO:0044822 IDA poly(A) RNA binding
GO:0071013 IDA catalytic step 2 spliceosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054707 dhx8 DEAH (Asp-Glu-Ala-His) box polypeptide 8 protein_coding Danio_rerio
ENSMUSG00000034931 Dhx8 DEAH (Asp-Glu-Ala-His) box polypeptide 8 protein_coding Mus_musculus

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