C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00047L_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000175906-ENSG00000067596 CGP 9606 17:43398959-43544463
GeneTranscriptPositionBiotype
ENSG00000067596 (DHX8)
DEAH (Asp-Glu-Ala-His) box polypeptide 8 		ENST00000262415 (DHX8-001) 43483966-43525670 protein_coding
ENST00000540306 (DHX8-002) 43483963-43526786 protein_coding
ENST00000587044 (DHX8-003) 43491194-43526796 retained_intron
ENST00000587574 (DHX8-004) 43522152-43526803 protein_coding
ENST00000589898 (DHX8-006) 43521396-43544463 protein_coding
ENST00000592258 (DHX8-005) 43483865-43492292 nonsense_mediated_decay
ENST00000605777 (DHX8-007) 43484140-43490493 protein_coding
ENSG00000175906 (ARL4D)
ADP-ribosylation factor-like 4D 		ENST00000320033 (ARL4D-001) 43398959-43401137 protein_coding
ENSG00000237888 (AC087650.1)
 ENST00000431445 (AC087650.1-001) 43476198-43476665 processed_pseudogene
ENSG00000252279 (RNU6-406P)
RNA, U6 small nuclear 406, pseudogene 		ENST00000516470 (RNU6-406P-201) 43445507-43445613 snRNA
ENSG00000267151 (MIR2117)
microRNA 2117 		ENST00000588060 (MIR2117-001) 43444707-43451200 lincRNA
CIL_00047L_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034936-ENSMUSG00000034931 CGP 10090 11:101665541-101767358
GeneTranscriptPositionBiotype
ENSMUSG00000034931 (Dhx8)
DEAH (Asp-Glu-Ala-His) box polypeptide 8 		ENSMUST00000039152 (Dhx8-001) 101732950-101767358 protein_coding
ENSMUST00000125409 (Dhx8-005) 101732919-101735696 retained_intron
ENSMUST00000129741 (Dhx8-002) 101733041-101766807 protein_coding
ENSMUST00000141461 (Dhx8-004) 101751779-101753176 retained_intron
ENSMUST00000156842 (Dhx8-003) 101733029-101734439 retained_intron
ENSMUSG00000034936 (Arl4d)
ADP-ribosylation factor-like 4D 		ENSMUST00000039388 (Arl4d-001) 101665541-101667832 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00047L_0001ENSG00000067596ENST00000262415ENST00000540306ENST00000587044ENST00000587574ENST00000589898ENST00000592258ENST00000605777ENSG00000175906ENST00000320033ENSG00000237888ENST00000431445ENSG00000252279ENST00000516470ENSG00000267151ENST00000588060CIL_00047L_0002ENSMUSG00000034931ENSMUST00000039152ENSMUST00000125409ENSMUST00000129741ENSMUST00000141461ENSMUST00000156842ENSMUSG00000034936ENSMUST00000039388
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00047L_0001ENSG00000067596ENST00000262415ENST00000540306ENSG00000175906ENST00000320033ENSG00000237888ENST00000431445ENSG00000252279ENST00000516470ENSG00000267151ENST00000588060CIL_00047L_0002ENSMUSG00000034931ENSMUST00000039152ENSMUST00000129741ENSMUSG00000034936ENSMUST00000039388
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000067596 ENST00000262415 N/A N/A 0.476±0.00 1.443±0.13 2.172±0.00 1.970±0.00 0.735±0.38 1.206±0.18 1.444±0.07 3.054±2.19 3.441±1.91 4.549±1.48 4.931±2.37 2.941±0.00
ENST00000540306 3.560±0.00 N/A 1.573±0.00 1.367±0.18 2.491±0.00 1.767±0.56 0.794±0.21 1.258±0.52 3.002±0.00 2.288±0.00 2.303±0.00 5.059±1.65 4.299±1.45 7.730±2.84
ENST00000587044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000605777 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000175906 ENST00000320033 3.958±0.00 3.093±0.00 0.923±0.00 3.763±0.48 2.412±1.44 6.662±5.54 1.830±1.05 20.062±18.50 7.340±4.01 9.802±9.11 0.780±0.18 12.914±9.64 9.642±2.66 18.731±4.49
ENSG00000237888 ENST00000431445 0.286±0.00 0.492±0.00 N/A N/A 0.143±0.00 0.130±0.00 0.121±0.00 0.230±0.00 0.081±0.00 0.365±0.00 0.315±0.00 0.062±0.00 N/A 0.160±0.00
ENSG00000252279 ENST00000516470 N/A N/A N/A N/A N/A N/A N/A N/A 0.276±0.00 N/A N/A N/A N/A N/A
ENSG00000267151 ENST00000588060 0.038±0.00 0.123±0.00 N/A N/A 0.042±0.00 N/A N/A 0.206±0.00 0.153±0.04 N/A N/A 0.209±0.10 0.167±0.01 0.181±0.11
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034931 ENSMUST00000039152 4.682±1.38 1.612±0.47 5.412±0.25 11.282±0.93 3.827±1.32 3.970±0.44 1.399±0.40 3.391±0.97 3.684±2.99 4.563±0.25 2.760±0.34 6.969±5.82 16.001±7.71 10.566±6.58
ENSMUST00000125409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129741 1.765±0.00 2.023±0.60 0.957±0.00 3.250±0.62 2.986±1.13 3.587±1.50 1.881±0.46 1.402±0.20 1.784±0.45 1.602±0.28 N/A 5.438±1.54 10.251±0.00 4.095±1.88
ENSMUST00000141461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000034936 ENSMUST00000039388 21.222±4.54 5.372±0.65 15.762±1.09 12.929±6.54 8.968±2.65 13.590±0.91 12.215±6.42 18.204±4.69 7.170±5.53 51.162±16.25 2.331±0.39 12.828±3.06 12.532±5.25 7.100±1.77

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