C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000070061 IKBKAP 9606 - 9:108867517-108934116 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000374647 IKBKAP-001 108867517-108934116 protein_coding
  ENST00000467959 IKBKAP-002 108879461-108889684 processed_transcript
  ENST00000495759 IKBKAP-003 108867517-108893083 nonsense_mediated_decay
  ENST00000537196 IKBKAP-201 108868641-108933953 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000374647ENST00000495759ENST00000537196
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000374647 1.022±0.00 1.580±0.00 0.673±0.00 1.964±0.09 N/A 0.883±0.19 0.988±0.54 1.913±0.22 1.220±0.06 1.066±0.00 0.708±0.00 2.279±1.08 2.214±0.93 4.292±0.00
ENST00000495759 N/A 1.227±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.596±0.00 2.003±0.00 4.039±0.00
ENST00000537196 2.189±0.00 2.499±0.00 1.483±0.00 4.095±0.00 3.183±0.16 2.668±0.22 1.972±0.72 2.597±1.09 2.205±0.30 2.960±0.00 1.389±0.10 3.962±1.55 2.513±0.18 7.429±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GJ CIL_0001GJ_0001 CGP 9:108862266-108934116
CIL_0001GI CIL_0001GI_0001 CGP 9:108867517-108950744

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0004871 TAS signal transducer activity
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0006325 TAS chromatin organization
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0006368 IDA transcription elongation from RNA polymerase II promoter
GO:0006461 TAS protein complex assembly
GO:0006468 TAS protein phosphorylation
GO:0006955 TAS immune response
GO:0007165 TAS signal transduction
GO:0008023 IDA transcription elongation factor complex
GO:0008607 IDA phosphorylase kinase regulator activity
GO:0016591 IDA DNA-directed RNA polymerase II, holoenzyme
GO:0030335 ISS positive regulation of cell migration
GO:0033588 IDA Elongator holoenzyme complex
GO:0045859 IDA regulation of protein kinase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000094204 ikbkap inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein protein_coding Danio_rerio
ENSMUSG00000028431 Ikbkap inhibitor of kappa light polypeptide enhancer in B cells, kinase complex-associated protein protein_coding Mus_musculus

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