C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001GI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000070061-ENSG00000119328 CGP 9606 9:108867517-108950744
GeneTranscriptPositionBiotype
ENSG00000070061 (IKBKAP)
inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein 		ENST00000374647 (IKBKAP-001) 108867517-108934116 protein_coding
ENST00000467959 (IKBKAP-002) 108879461-108889684 processed_transcript
ENST00000495759 (IKBKAP-003) 108867517-108893083 nonsense_mediated_decay
ENST00000537196 (IKBKAP-201) 108868641-108933953 protein_coding
ENSG00000119326 (CTNNAL1)
catenin (cadherin-associated protein), alpha-like 1 		ENST00000325551 (CTNNAL1-001) 108942571-109013529 protein_coding
ENST00000374593 (CTNNAL1-005) 108991896-109013512 protein_coding
ENST00000374594 (CTNNAL1-003) 108942579-108963555 protein_coding
ENST00000374595 (CTNNAL1-002) 108942569-109013522 protein_coding
ENST00000488130 (CTNNAL1-004) 108972675-108977420 processed_transcript
ENSG00000119328 (FAM206A)
family with sequence similarity 206, member A 		ENST00000322940 (FAM206A-001) 108934181-108940968 protein_coding
ENST00000374624 (FAM206A-004) 108934487-108950744 protein_coding
ENST00000445175 (FAM206A-002) 108934540-108939634 protein_coding
ENST00000466200 (FAM206A-003) 108934443-108936075 processed_transcript
CIL_0001GI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028431-ENSMUSG00000038827 CGP 10090 4:56749680-56809601
GeneTranscriptPositionBiotype
ENSMUSG00000028431 (Ikbkap)
inhibitor of kappa light polypeptide enhancer in B cells, kinase complex-associated protein 		ENSMUST00000030140 (Ikbkap-001) 56749680-56802331 protein_coding
ENSMUST00000126441 (Ikbkap-005) 56776466-56779739 retained_intron
ENSMUST00000139445 (Ikbkap-003) 56754868-56758391 retained_intron
ENSMUST00000140595 (Ikbkap-004) 56767857-56772616 retained_intron
ENSMUST00000150002 (Ikbkap-002) 56751015-56763330 retained_intron
ENSMUST00000171411 (Ikbkap-006) 56751012-56757285 retained_intron
ENSMUSG00000038827 (Fam206a)
family with sequence similarity 206, member A 		ENSMUST00000045368 (Fam206a-001) 56802349-56809601 protein_coding
ENSMUST00000131520 (Fam206a-002) 56802352-56809601 nonsense_mediated_decay
ENSMUST00000147763 (Fam206a-004) 56802618-56805947 nonsense_mediated_decay
ENSMUST00000152638 (Fam206a-003) 56802345-56804625 retained_intron
ENSMUSG00000080370 (Gm22952)
predicted gene, 22952 		ENSMUST00000116720 (Gm22952-201) 56761922-56762041 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GI_0001ENSG00000070061ENST00000374647ENST00000467959ENST00000495759ENST00000537196ENSG00000119326ENST00000325551ENST00000374593ENST00000374594ENST00000374595ENST00000488130ENSG00000119328ENST00000322940ENST00000374624ENST00000445175ENST00000466200CIL_0001GI_0002ENSMUSG00000028431ENSMUST00000030140ENSMUST00000126441ENSMUST00000139445ENSMUST00000140595ENSMUST00000150002ENSMUST00000171411ENSMUSG00000038827ENSMUST00000045368ENSMUST00000131520ENSMUST00000147763ENSMUST00000152638ENSMUSG00000080370ENSMUST00000116720
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GI_0001ENSG00000070061ENST00000374647ENST00000495759ENST00000537196ENSG00000119326ENST00000325551ENST00000374594ENST00000374595ENSG00000119328ENST00000322940ENST00000374624ENST00000445175ENST00000466200CIL_0001GI_0002ENSMUSG00000028431ENSMUST00000030140ENSMUST00000150002ENSMUST00000171411ENSMUSG00000038827ENSMUST00000045368ENSMUST00000131520ENSMUST00000147763ENSMUST00000152638ENSMUSG00000080370ENSMUST00000116720
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000070061 ENST00000374647 1.022±0.00 1.580±0.00 0.673±0.00 1.964±0.09 N/A 0.883±0.19 0.988±0.54 1.913±0.22 1.220±0.06 1.066±0.00 0.708±0.00 2.279±1.08 2.214±0.93 4.292±0.00
ENST00000467959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495759 N/A 1.227±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.596±0.00 2.003±0.00 4.039±0.00
ENST00000537196 2.189±0.00 2.499±0.00 1.483±0.00 4.095±0.00 3.183±0.16 2.668±0.22 1.972±0.72 2.597±1.09 2.205±0.30 2.960±0.00 1.389±0.10 3.962±1.55 2.513±0.18 7.429±0.35
ENSG00000119326 ENST00000325551 9.352±0.00 8.169±0.00 4.195±0.00 4.331±0.00 8.261±3.89 6.470±2.95 9.374±5.14 12.988±6.93 4.384±0.21 24.628±11.58 8.279±5.89 25.711±17.36 19.875±12.89 21.020±0.80
ENST00000374593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000374594 N/A N/A N/A N/A 6.119±0.00 N/A N/A N/A 2.836±0.00 N/A N/A 26.003±0.00 N/A N/A
ENST00000374595 N/A N/A N/A N/A N/A 0.980±0.34 N/A N/A N/A 8.640±0.00 N/A N/A 2.023±0.07 N/A
ENST00000488130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000119328 ENST00000322940 4.121±0.00 4.406±0.00 N/A 2.205±1.66 5.401±0.00 6.024±0.00 4.380±0.00 3.467±2.44 1.859±0.80 3.089±0.00 2.073±1.33 4.901±2.23 3.573±0.61 7.291±1.70
ENST00000374624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.050±0.00
ENST00000445175 N/A N/A N/A N/A N/A 6.107±0.00 N/A 1.430±0.00 N/A N/A N/A 4.849±0.00 N/A N/A
ENST00000466200 N/A N/A N/A N/A N/A N/A N/A N/A 0.875±0.00 N/A 0.975±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028431 ENSMUST00000030140 2.724±2.22 2.199±0.64 0.835±0.00 5.836±2.31 1.712±0.66 1.480±0.40 1.427±0.35 1.333±0.19 1.151±0.21 2.147±0.86 2.192±0.75 4.526±1.20 6.873±5.96 1.869±0.68
ENSMUST00000126441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.173±0.00 N/A
ENSMUST00000171411 5.998±1.07 9.022±2.08 5.723±0.50 18.163±3.83 6.734±1.05 3.964±0.53 4.909±0.59 4.687±0.63 3.870±1.86 6.073±0.92 5.148±0.00 8.431±1.70 9.394±1.90 2.445±0.05
ENSMUSG00000038827 ENSMUST00000045368 2.626±1.20 2.514±0.42 1.768±0.37 3.044±2.16 1.088±0.36 1.424±0.33 0.575±0.26 1.750±0.27 1.279±0.95 1.907±0.11 0.395±0.17 2.584±1.12 2.259±1.36 2.493±1.51
ENSMUST00000131520 0.382±0.13 N/A 0.428±0.00 N/A N/A N/A 0.132±0.02 0.248±0.04 0.315±0.00 N/A 0.180±0.09 0.887±0.27 0.411±0.00 1.654±0.36
ENSMUST00000147763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.341±0.00
ENSMUST00000152638 N/A 0.961±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000080370 ENSMUST00000116720 N/A N/A 18.562±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 11.364±0.00 N/A N/A

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