C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: inhibitor of kappa light polypeptide enhancer in B cells, kinase complex-associated protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028431 Ikbkap 10090 - 4:56749680-56802331 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030140 Ikbkap-001 56749680-56802331 protein_coding
  ENSMUST00000126441 Ikbkap-005 56776466-56779739 retained_intron
  ENSMUST00000139445 Ikbkap-003 56754868-56758391 retained_intron
  ENSMUST00000140595 Ikbkap-004 56767857-56772616 retained_intron
  ENSMUST00000150002 Ikbkap-002 56751015-56763330 retained_intron
  ENSMUST00000171411 Ikbkap-006 56751012-56757285 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030140ENSMUST00000150002ENSMUST00000171411
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030140 2.724±2.22 2.199±0.64 0.835±0.00 5.836±2.31 1.712±0.66 1.480±0.40 1.427±0.35 1.333±0.19 1.151±0.21 2.147±0.86 2.192±0.75 4.526±1.20 6.873±5.96 1.869±0.68
ENSMUST00000150002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.173±0.00 N/A
ENSMUST00000171411 5.998±1.07 9.022±2.08 5.723±0.50 18.163±3.83 6.734±1.05 3.964±0.53 4.909±0.59 4.687±0.63 3.870±1.86 6.073±0.92 5.148±0.00 8.431±1.70 9.394±1.90 2.445±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GJ CIL_0001GJ_0002 CGP 4:56743413-56802331
CIL_0001GI CIL_0001GI_0002 CGP 4:56749680-56809601

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005730 IEA nucleolus
GO:0005737 ISS cytoplasm
GO:0006357 ISS regulation of transcription from RNA polymerase II promoter
GO:0006368 IEA transcription elongation from RNA polymerase II promoter
GO:0008023 ISS transcription elongation factor complex
GO:0008607 ISS phosphorylase kinase regulator activity
GO:0016591 IEA DNA-directed RNA polymerase II, holoenzyme
GO:0030335 IMP positive regulation of cell migration
GO:0033588 ISS Elongator holoenzyme complex
GO:0045859 IEA regulation of protein kinase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000094204 ikbkap inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein protein_coding Danio_rerio
ENSG00000070061 IKBKAP inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein protein_coding Homo_sapiens

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