C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein tyrosine phosphatase, non-receptor type 21
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000070778 PTPN21 9606 - 14:88465778-88554733 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000328736 PTPN21-201 88465778-88550622 protein_coding
  ENST00000536337 PTPN21-003 88467955-88550530 nonsense_mediated_decay
  ENST00000553531 PTPN21-008 88467770-88469616 protein_coding
  ENST00000554178 PTPN21-007 88512318-88550619 processed_transcript
  ENST00000554270 PTPN21-004 88467955-88550530 retained_intron
  ENST00000554628 PTPN21-002 88492900-88551489 processed_transcript
  ENST00000555243 PTPN21-005 88504425-88551460 protein_coding
  ENST00000556564 PTPN21-001 88465781-88554733 protein_coding
  ENST00000557249 PTPN21-006 88469965-88473932 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000328736ENST00000536337ENST00000553531ENST00000554178ENST00000554270ENST00000554628ENST00000555243ENST00000556564
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000328736 N/A 1.545±0.00 1.101±0.00 1.018±0.00 3.880±1.41 0.588±0.00 1.153±0.00 N/A 4.016±0.00 N/A N/A 3.308±1.92 2.653±0.73 7.065±4.31
ENST00000536337 N/A N/A N/A N/A N/A N/A N/A 1.306±0.00 N/A 3.305±0.00 0.814±0.20 N/A N/A N/A
ENST00000553531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.710±0.00 N/A N/A N/A
ENST00000554178 N/A N/A 8.947±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554270 N/A N/A N/A N/A 2.009±0.00 0.873±0.00 0.732±0.00 N/A N/A N/A N/A 1.480±0.00 1.160±0.00 N/A
ENST00000554628 N/A N/A N/A N/A N/A 1.785±0.00 N/A N/A N/A N/A 2.396±0.00 N/A N/A N/A
ENST00000555243 N/A N/A 4.522±0.00 N/A N/A 5.234±0.00 N/A N/A N/A 8.885±0.00 N/A N/A N/A N/A
ENST00000556564 3.770±0.00 N/A N/A 1.620±0.00 N/A 5.740±0.00 8.809±0.00 3.587±0.00 0.608±0.00 5.537±0.00 1.155±0.00 0.903±0.00 N/A 2.749±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004KO CIL_0004KO_0001 CGP 14:88180103-88470350
CIL_0004KP CIL_0004KP_0001 CGP 14:88384924-88554733
CIL_0004KQ CIL_0004KQ_0001 CGP 14:88465778-88627596

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0006470 TAS:IEA protein dephosphorylation
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062248 ptpn21 protein tyrosine phosphatase, non-receptor type 21 protein_coding Danio_rerio
ENSMUSG00000021009 Ptpn21 protein tyrosine phosphatase, non-receptor type 21 protein_coding Mus_musculus

Loading