C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, non-receptor type 21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000556564 PTPN21-001 ENSG00000070778 9606 - 14:88465781-88554733 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartKidneyLiverLungMuscleOvaryTestisENST00000556564
Transcript ID Adipose Brain Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000556564 3.770±0.00 1.620±0.00 5.740±0.00 8.809±0.00 3.587±0.00 0.608±0.00 5.537±0.00 1.155±0.00 0.903±0.00 2.749±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004KO CIL_0004KO_0001 CGP 14:88180103-88470350
CIL_0004KP CIL_0004KP_0001 CGP 14:88384924-88554733
CIL_0004KQ CIL_0004KQ_0001 CGP 14:88465778-88627596

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0006470 TAS:IEA protein dephosphorylation
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170188 Ptpn21-202 protein_coding Mus_musculus 0 3498
ENSMUST00000085116 Ptpn21-201 protein_coding Mus_musculus 0 3478

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