C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004KQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000070778-ENSG00000100722 CGP 9606 14:88465778-88627596
GeneTranscriptPositionBiotype
ENSG00000042317 (SPATA7)
spermatogenesis associated 7 		ENST00000045347 (SPATA7-004) 88385819-88438455 protein_coding
ENST00000356583 (SPATA7-201) 88385668-88438458 protein_coding
ENST00000393545 (SPATA7-002) 88385530-88438456 protein_coding
ENST00000553303 (SPATA7-019) 88432623-88438077 retained_intron
ENST00000553626 (SPATA7-003) 88385691-88438453 retained_intron
ENST00000553885 (SPATA7-015) 88385698-88426585 protein_coding
ENST00000553908 (SPATA7-018) 88385744-88426520 nonsense_mediated_decay
ENST00000554102 (SPATA7-012) 88385676-88410783 processed_transcript
ENST00000554168 (SPATA7-006) 88385638-88416844 nonsense_mediated_decay
ENST00000554802 (SPATA7-020) 88433157-88455283 protein_coding
ENST00000555356 (SPATA7-010) 88385673-88416761 nonsense_mediated_decay
ENST00000555401 (SPATA7-014) 88385690-88426446 protein_coding
ENST00000555515 (SPATA7-013) 88385678-88426685 nonsense_mediated_decay
ENST00000555534 (SPATA7-008) 88385649-88426517 nonsense_mediated_decay
ENST00000555715 (SPATA7-011) 88385673-88396203 nonsense_mediated_decay
ENST00000556406 (SPATA7-021) 88431171-88470350 protein_coding
ENST00000556553 (SPATA7-001) 88384924-88438460 protein_coding
ENST00000556666 (SPATA7-005) 88415926-88438455 retained_intron
ENST00000556870 (SPATA7-007) 88385644-88426504 nonsense_mediated_decay
ENST00000557248 (SPATA7-017) 88385739-88426602 nonsense_mediated_decay
ENST00000557567 (SPATA7-016) 88385700-88393636 retained_intron
ENST00000557724 (SPATA7-009) 88385673-88396193 nonsense_mediated_decay
ENSG00000070778 (PTPN21)
protein tyrosine phosphatase, non-receptor type 21 		ENST00000328736 (PTPN21-201) 88465778-88550622 protein_coding
ENST00000536337 (PTPN21-003) 88467955-88550530 nonsense_mediated_decay
ENST00000553531 (PTPN21-008) 88467770-88469616 protein_coding
ENST00000554178 (PTPN21-007) 88512318-88550619 processed_transcript
ENST00000554270 (PTPN21-004) 88467955-88550530 retained_intron
ENST00000554628 (PTPN21-002) 88492900-88551489 processed_transcript
ENST00000555243 (PTPN21-005) 88504425-88551460 protein_coding
ENST00000556564 (PTPN21-001) 88465781-88554733 protein_coding
ENST00000557249 (PTPN21-006) 88469965-88473932 retained_intron
ENSG00000100722 (ZC3H14)
zinc finger CCCH-type containing 14 		ENST00000251038 (ZC3H14-001) 88562909-88627596 protein_coding
ENST00000302216 (ZC3H14-002) 88562970-88612407 protein_coding
ENST00000318308 (ZC3H14-012) 88594399-88611886 protein_coding
ENST00000336693 (ZC3H14-008) 88563347-88611867 protein_coding
ENST00000393514 (ZC3H14-011) 88563134-88611810 protein_coding
ENST00000406216 (ZC3H14-015) 88594435-88611951 protein_coding
ENST00000553495 (ZC3H14-030) 88563008-88572638 nonsense_mediated_decay
ENST00000554020 (ZC3H14-026) 88602035-88611890 retained_intron
ENST00000554602 (ZC3H14-018) 88562982-88572113 protein_coding
ENST00000555120 (ZC3H14-022) 88563601-88572179 protein_coding
ENST00000555755 (ZC3H14-007) 88563038-88611991 protein_coding
ENST00000555792 (ZC3H14-027) 88607284-88611872 protein_coding
ENST00000555799 (ZC3H14-020) 88563026-88572894 protein_coding
ENST00000555851 (ZC3H14-029) 88608112-88611883 processed_transcript
ENST00000555900 (ZC3H14-013) 88594415-88611884 protein_coding
ENST00000556000 (ZC3H14-009) 88572048-88611888 protein_coding
ENST00000556110 (ZC3H14-024) 88574789-88602009 nonsense_mediated_decay
ENST00000556158 (ZC3H14-019) 88563012-88572814 protein_coding
ENST00000556945 (ZC3H14-005) 88563010-88611884 protein_coding
ENST00000557047 (ZC3H14-028) 88574813-88586735 protein_coding
ENST00000557491 (ZC3H14-017) 88608422-88612979 retained_intron
ENST00000557605 (ZC3H14-023) 88573693-88578141 processed_transcript
ENST00000557607 (ZC3H14-006) 88563014-88612001 protein_coding
ENST00000557693 (ZC3H14-021) 88563522-88572646 protein_coding
ENST00000557737 (ZC3H14-025) 88594437-88602900 protein_coding
ENSG00000222990 (RNU4-22P)
RNA, U4 small nuclear 22, pseudogene 		ENST00000411058 (RNU4-22P-201) 88513498-88513663 snRNA
ENSG00000258789 (RP11-507K2.3)
 ENST00000556328 (RP11-507K2.3-001) 88551597-88552493 antisense
ENSG00000278576 (RP11-507K2.6)
 ENST00000617439 (RP11-507K2.6-001) 88589231-88592408 sense_intronic
CIL_0004KQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021009-ENSMUSG00000021012 CGP 10090 12:98676741-98787774
GeneTranscriptPositionBiotype
ENSMUSG00000021009 (Ptpn21)
protein tyrosine phosphatase, non-receptor type 21 		ENSMUST00000085116 (Ptpn21-201) 98676741-98734645 protein_coding
ENSMUST00000170188 (Ptpn21-202) 98676741-98737405 protein_coding
ENSMUSG00000051166 (Eml5)
echinoderm microtubule associated protein like 5 		ENSMUST00000065716 (Eml5-201) 98786604-98901484 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004KQ_0001ENSG00000042317ENST00000045347ENST00000356583ENST00000393545ENST00000553303ENST00000553626ENST00000553885ENST00000553908ENST00000554102ENST00000554168ENST00000554802ENST00000555356ENST00000555401ENST00000555515ENST00000555534ENST00000555715ENST00000556406ENST00000556553ENST00000556666ENST00000556870ENST00000557248ENST00000557567ENST00000557724ENSG00000070778ENST00000328736ENST00000536337ENST00000553531ENST00000554178ENST00000554270ENST00000554628ENST00000555243ENST00000556564ENST00000557249ENSG00000100722ENST00000251038ENST00000302216ENST00000318308ENST00000336693ENST00000393514ENST00000406216ENST00000553495ENST00000554020ENST00000554602ENST00000555120ENST00000555755ENST00000555792ENST00000555799ENST00000555851ENST00000555900ENST00000556000ENST00000556110ENST00000556158ENST00000556945ENST00000557047ENST00000557491ENST00000557605ENST00000557607ENST00000557693ENST00000557737ENSG00000222990ENST00000411058ENSG00000258789ENST00000556328ENSG00000278576ENST00000617439CIL_0004KQ_0002ENSMUSG00000021009ENSMUST00000085116ENSMUST00000170188ENSMUSG00000051166ENSMUST00000065716
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004KQ_0001ENSG00000042317ENST00000045347ENST00000356583ENST00000393545ENST00000556666ENSG00000070778ENST00000328736ENST00000536337ENST00000553531ENST00000554178ENST00000554270ENST00000554628ENST00000555243ENST00000556564ENSG00000100722ENST00000251038ENST00000302216ENST00000336693ENST00000393514ENST00000555755ENST00000555900ENST00000556000ENST00000556945ENST00000557607ENST00000557693ENSG00000222990ENST00000411058ENSG00000258789ENST00000556328ENSG00000278576ENST00000617439CIL_0004KQ_0002ENSMUSG00000021009ENSMUST00000085116ENSMUST00000170188ENSMUSG00000051166ENSMUST00000065716
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000042317 ENST00000045347 N/A N/A 2.907±0.00 N/A 3.754±0.00 2.386±0.00 2.139±0.00 N/A 5.388±0.00 6.163±0.00 N/A N/A N/A N/A
ENST00000356583 2.442±0.00 2.185±0.00 N/A 4.513±0.00 4.222±0.00 3.322±0.00 N/A 4.171±0.00 N/A N/A 1.092±0.00 3.609±1.20 N/A 31.619±7.64
ENST00000393545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.127±0.00 N/A N/A
ENST00000553303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.521±0.00 N/A N/A
ENST00000556870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000070778 ENST00000328736 N/A 1.545±0.00 1.101±0.00 1.018±0.00 3.880±1.41 0.588±0.00 1.153±0.00 N/A 4.016±0.00 N/A N/A 3.308±1.92 2.653±0.73 7.065±4.31
ENST00000536337 N/A N/A N/A N/A N/A N/A N/A 1.306±0.00 N/A 3.305±0.00 0.814±0.20 N/A N/A N/A
ENST00000553531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.710±0.00 N/A N/A N/A
ENST00000554178 N/A N/A 8.947±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554270 N/A N/A N/A N/A 2.009±0.00 0.873±0.00 0.732±0.00 N/A N/A N/A N/A 1.480±0.00 1.160±0.00 N/A
ENST00000554628 N/A N/A N/A N/A N/A 1.785±0.00 N/A N/A N/A N/A 2.396±0.00 N/A N/A N/A
ENST00000555243 N/A N/A 4.522±0.00 N/A N/A 5.234±0.00 N/A N/A N/A 8.885±0.00 N/A N/A N/A N/A
ENST00000556564 3.770±0.00 N/A N/A 1.620±0.00 N/A 5.740±0.00 8.809±0.00 3.587±0.00 0.608±0.00 5.537±0.00 1.155±0.00 0.903±0.00 N/A 2.749±0.00
ENST00000557249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000100722 ENST00000251038 N/A N/A N/A 0.654±0.15 N/A 0.398±0.00 0.153±0.00 N/A 0.359±0.00 0.502±0.00 N/A 0.612±0.00 N/A N/A
ENST00000302216 4.344±0.00 4.241±0.00 3.052±0.00 4.701±0.58 5.465±0.33 4.728±0.65 3.072±1.21 6.194±1.15 4.510±1.04 2.857±0.08 2.902±0.90 5.672±3.83 2.739±0.80 18.707±1.16
ENST00000318308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000336693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.154±0.00 3.860±0.00 27.994±0.00
ENST00000393514 2.984±0.00 N/A N/A N/A 3.897±0.00 N/A 3.981±0.00 4.455±0.00 N/A 3.506±0.00 2.770±0.00 N/A N/A 16.150±0.00
ENST00000406216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555755 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.297±0.00 N/A N/A N/A N/A
ENST00000555792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555799 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.408±0.00
ENST00000556000 4.319±0.00 N/A N/A N/A 3.923±0.00 5.752±0.00 N/A 7.391±0.00 3.256±0.00 3.015±0.00 5.416±0.00 4.094±1.44 4.206±0.43 25.697±5.71
ENST00000556110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556158 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556945 N/A N/A N/A 3.092±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.838±0.81 21.565±0.00
ENST00000557047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557607 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.726±0.00
ENST00000557693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.166±0.00 N/A N/A N/A
ENST00000557737 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000222990 ENST00000411058 N/A N/A N/A 0.095±0.00 0.181±0.00 N/A 0.168±0.00 1.759±0.00 N/A N/A N/A 2.810±3.49 N/A N/A
ENSG00000258789 ENST00000556328 N/A 0.729±0.00 N/A 0.888±0.00 0.300±0.09 N/A N/A 0.430±0.00 N/A 1.344±0.00 0.207±0.00 0.327±0.21 0.290±0.19 0.917±0.11
ENSG00000278576 ENST00000617439 0.135±0.00 0.275±0.00 0.614±0.00 0.801±0.41 0.264±0.07 0.587±0.54 0.406±0.30 0.189±0.04 0.291±0.26 0.401±0.36 0.273±0.00 0.171±0.10 0.036±0.02 0.352±0.21
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021009 ENSMUST00000085116 1.232±0.26 3.461±2.27 0.997±0.00 0.672±0.14 2.152±0.62 2.860±1.83 0.869±0.12 1.206±0.32 0.596±0.40 2.513±0.46 N/A 3.636±2.82 0.702±0.24 1.989±1.17
ENSMUST00000170188 3.277±1.25 3.689±1.48 5.107±0.02 1.082±0.53 2.904±1.38 2.311±1.08 4.843±0.79 5.438±1.73 1.932±0.82 8.154±2.82 7.449±0.94 7.025±3.76 3.679±1.78 1.004±0.00
ENSMUSG00000051166 ENSMUST00000065716 0.990±0.22 1.256±0.31 2.201±0.00 9.928±0.58 1.531±0.30 0.465±0.12 0.664±0.14 1.671±0.13 0.823±0.32 0.985±0.19 0.792±0.31 1.347±0.64 1.597±0.50 N/A

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