C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, FYVE domain containing 26
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000072121 ZFYVE26 9606 - 14:67727374-67816590 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000347230 ZFYVE26-001 67746520-67816589 protein_coding
  ENST00000394455 ZFYVE26-009 67727374-67770477 retained_intron
  ENST00000553399 ZFYVE26-010 67815529-67816590 retained_intron
  ENST00000554523 ZFYVE26-004 67748229-67816587 retained_intron
  ENST00000554557 ZFYVE26-007 67748033-67816580 nonsense_mediated_decay
  ENST00000554783 ZFYVE26-012 67753711-67756421 retained_intron
  ENST00000555452 ZFYVE26-002 67760782-67816587 protein_coding
  ENST00000557204 ZFYVE26-011 67777584-67778327 retained_intron
  ENST00000557306 ZFYVE26-008 67750473-67761491 protein_coding
  ENST00000557366 ZFYVE26-006 67796221-67816585 retained_intron
  ENST00000557407 ZFYVE26-005 67797320-67816585 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000347230ENST00000394455ENST00000554523ENST00000554557ENST00000555452ENST00000557407
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000347230 1.447±0.00 1.037±0.00 0.941±0.00 1.034±0.19 1.367±0.42 1.055±0.62 1.390±1.12 0.559±0.00 0.927±0.28 1.420±0.50 1.065±0.17 1.299±0.52 1.325±0.63 1.286±0.01
ENST00000394455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.740±0.00 N/A N/A
ENST00000554523 N/A N/A 0.285±0.00 N/A N/A N/A N/A N/A 0.571±0.00 1.341±0.00 N/A N/A N/A N/A
ENST00000554557 N/A 0.941±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555452 N/A 0.809±0.00 N/A 0.464±0.00 0.790±0.14 N/A 0.405±0.00 N/A N/A 0.969±0.00 0.741±0.00 1.215±0.00 N/A N/A
ENST00000557407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.299±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002CM CIL_0002CM_0001 CGP 14:67676801-67734452
CIL_0001JS CIL_0001JS_0002 CGP 14:67701886-67816590
CIL_0002CJ CIL_0002CJ_0001 CGP 14:67727374-68730218

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000724 IMP double-strand break repair via homologous recombination
GO:0000910 IMP cytokinesis
GO:0005515 IPI protein binding
GO:0005765 IDA lysosomal membrane
GO:0005813 IDA centrosome
GO:0008219 IEA cell death
GO:0030496 IDA midbody
GO:0032266 IDA phosphatidylinositol-3-phosphate binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040131 zfyve26 zinc finger, FYVE domain containing 26 protein_coding Danio_rerio
ENSMUSG00000066440 Zfyve26 zinc finger, FYVE domain containing 26 protein_coding Mus_musculus

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