C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho-related BTB domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000072422 RHOBTB1 9606 - 10:60869438-61001440 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000337910 RHOBTB1-002 60869438-60944247 protein_coding
  ENST00000357917 RHOBTB1-001 60869438-61001440 protein_coding
  ENST00000461910 RHOBTB1-005 60871178-60872275 processed_transcript
  ENST00000483488 RHOBTB1-003 60877118-60888469 processed_transcript
  ENST00000490827 RHOBTB1-004 60871472-60875043 processed_transcript
  ENST00000496237 RHOBTB1-006 60871174-60871667 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000337910ENST00000357917ENST00000461910ENST00000490827
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000337910 3.353±0.00 0.446±0.00 0.811±0.00 1.323±0.59 3.302±0.00 1.918±0.00 2.768±2.11 10.433±0.00 1.642±0.64 0.625±0.00 8.886±4.40 2.970±0.43 4.483±1.70 6.121±0.82
ENST00000357917 1.695±0.00 N/A 0.733±0.00 0.728±0.00 1.704±0.00 0.264±0.07 N/A 2.881±0.00 N/A 0.781±0.00 N/A 2.688±0.00 7.645±2.09 N/A
ENST00000461910 N/A N/A 6.720±0.00 N/A 2.624±0.00 1.811±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490827 N/A N/A N/A N/A N/A N/A N/A N/A 4.463±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VT CIL_0002VT_0002 CGP 10:60869438-61453450

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005829 TAS cytosol
GO:0005886 TAS plasma membrane
GO:0006184 IEA GTP catabolic process
GO:0007165 IEA signal transduction
GO:0007264 TAS:IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0051056 TAS regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079468 RHOBTB1 Rho-related BTB domain containing 1 protein_coding Danio_rerio
ENSMUSG00000019944 Rhobtb1 Rho-related BTB domain containing 1 protein_coding Mus_musculus

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