C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002VT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000079468-ENSDARG00000014682 CGP 7955 12:8666335-8733388
GeneTranscriptPositionBiotype
ENSDARG00000014682 (tmem26b)
transmembrane protein 26b 		ENSDART00000020995 (tmem26b-201) 8726452-8733388 protein_coding
ENSDARG00000079468 (RHOBTB1)
Rho-related BTB domain containing 1 		ENSDART00000126661 (RHOBTB1-201) 8666335-8701514 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0002VT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000072422-ENSG00000196932 CGP 9606 10:60869438-61453450
GeneTranscriptPositionBiotype
ENSG00000072422 (RHOBTB1)
Rho-related BTB domain containing 1 		ENST00000337910 (RHOBTB1-002) 60869438-60944247 protein_coding
ENST00000357917 (RHOBTB1-001) 60869438-61001440 protein_coding
ENST00000461910 (RHOBTB1-005) 60871178-60872275 processed_transcript
ENST00000483488 (RHOBTB1-003) 60877118-60888469 processed_transcript
ENST00000490827 (RHOBTB1-004) 60871472-60875043 processed_transcript
ENST00000496237 (RHOBTB1-006) 60871174-60871667 processed_transcript
ENSG00000196932 (TMEM26)
transmembrane protein 26 		ENST00000277749 (TMEM26-002) 61412893-61431332 protein_coding
ENST00000399298 (TMEM26-001) 61406647-61453450 protein_coding
ENST00000488505 (TMEM26-003) 61412893-61453167 nonsense_mediated_decay
ENST00000503886 (TMEM26-004) 61406643-61453238 nonsense_mediated_decay
ENST00000507507 (TMEM26-005) 61409447-61414500 processed_transcript
ENSG00000227244 (LINC00845)
long intergenic non-protein coding RNA 845 		ENST00000417931 (LINC00845-002) 61016275-61026420 lincRNA
ENSG00000237233 (TMEM26-AS1)
TMEM26 antisense RNA 1 		ENST00000389640 (TMEM26-AS1-001) 61452639-61481956 antisense

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002VT_0001ENSDARG00000014682ENSDART00000020995ENSDARG00000079468ENSDART00000126661CIL_0002VT_0002ENSG00000072422ENST00000337910ENST00000357917ENST00000461910ENST00000483488ENST00000490827ENST00000496237ENSG00000196932ENST00000277749ENST00000399298ENST00000488505ENST00000503886ENST00000507507ENSG00000227244ENST00000417931ENSG00000237233ENST00000389640
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002VT_0001ENSDARG00000014682ENSDART00000020995ENSDARG00000079468ENSDART00000126661CIL_0002VT_0002ENSG00000072422ENST00000337910ENST00000357917ENST00000461910ENST00000490827ENSG00000196932ENST00000277749ENST00000399298ENST00000488505ENST00000503886ENST00000507507ENSG00000227244ENST00000417931ENSG00000237233ENST00000389640
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000014682 ENSDART00000020995 N/A N/A N/A N/A N/A N/A N/A 0.550±0.26 N/A N/A N/A N/A N/A N/A
ENSDARG00000079468 ENSDART00000126661 N/A N/A N/A 1.958±0.00 N/A N/A 0.054±0.00 0.092±0.00 0.019±0.00 N/A 0.260±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000072422 ENST00000337910 3.353±0.00 0.446±0.00 0.811±0.00 1.323±0.59 3.302±0.00 1.918±0.00 2.768±2.11 10.433±0.00 1.642±0.64 0.625±0.00 8.886±4.40 2.970±0.43 4.483±1.70 6.121±0.82
ENST00000357917 1.695±0.00 N/A 0.733±0.00 0.728±0.00 1.704±0.00 0.264±0.07 N/A 2.881±0.00 N/A 0.781±0.00 N/A 2.688±0.00 7.645±2.09 N/A
ENST00000461910 N/A N/A 6.720±0.00 N/A 2.624±0.00 1.811±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490827 N/A N/A N/A N/A N/A N/A N/A N/A 4.463±0.00 N/A N/A N/A N/A N/A
ENST00000496237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000196932 ENST00000277749 0.175±0.00 0.645±0.00 N/A N/A 0.814±0.00 1.035±0.00 N/A N/A N/A 0.358±0.00 N/A N/A 0.484±0.00 0.731±0.00
ENST00000399298 0.015±0.00 0.113±0.00 N/A 0.073±0.04 0.184±0.03 0.089±0.00 0.021±0.00 0.355±0.06 0.078±0.02 0.178±0.02 0.022±0.00 0.261±0.12 0.291±0.08 0.329±0.02
ENST00000488505 N/A N/A N/A 0.013±0.00 N/A N/A 0.058±0.00 N/A 0.142±0.00 N/A N/A N/A N/A N/A
ENST00000503886 0.042±0.00 0.170±0.00 N/A N/A N/A N/A 0.043±0.00 0.346±0.00 N/A 0.271±0.00 N/A 0.133±0.03 0.184±0.07 0.600±0.11
ENST00000507507 N/A N/A 0.272±0.00 N/A 0.302±0.00 0.119±0.00 N/A N/A N/A 0.100±0.00 N/A N/A N/A N/A
ENSG00000227244 ENST00000417931 N/A N/A 0.544±0.00 0.060±0.04 N/A N/A N/A 0.192±0.00 N/A N/A N/A N/A N/A 0.066±0.00
ENSG00000237233 ENST00000389640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.545±0.00 N/A

Loading