C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho-related BTB domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019944 Rhobtb1 10090 + 10:69151434-69291791 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020101 Rhobtb1-001 69212634-69291791 protein_coding
  ENSMUST00000067908 Rhobtb1-201 69213194-69291780 protein_coding
  ENSMUST00000163497 Rhobtb1-007 69213084-69266190 protein_coding
  ENSMUST00000163760 Rhobtb1-005 69279345-69289998 protein_coding
  ENSMUST00000164034 Rhobtb1-011 69208552-69289900 protein_coding
  ENSMUST00000164212 Rhobtb1-008 69213171-69249723 protein_coding
  ENSMUST00000164876 Rhobtb1-004 69212657-69273527 retained_intron
  ENSMUST00000165765 Rhobtb1-013 69279458-69286907 processed_transcript
  ENSMUST00000167286 Rhobtb1-010 69151434-69249713 protein_coding
  ENSMUST00000167384 Rhobtb1-006 69212676-69289998 protein_coding
  ENSMUST00000168117 Rhobtb1-003 69215302-69289710 nonsense_mediated_decay
  ENSMUST00000169569 Rhobtb1-012 69265637-69270209 processed_transcript
  ENSMUST00000172261 Rhobtb1-009 69219385-69249728 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020101ENSMUST00000067908ENSMUST00000163497ENSMUST00000164034ENSMUST00000164212ENSMUST00000167384ENSMUST00000168117
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020101 5.205±3.40 0.885±0.00 5.655±1.80 2.909±0.06 0.938±0.11 0.775±0.20 2.342±0.72 4.937±0.57 2.371±1.37 1.343±0.35 2.234±0.97 5.288±1.41 3.273±1.95 1.963±0.82
ENSMUST00000067908 1.813±0.17 0.806±0.27 3.823±0.99 0.858±0.43 1.017±0.27 1.186±0.17 7.288±2.36 1.981±0.70 1.986±1.28 1.899±0.30 6.993±1.63 10.295±0.00 2.375±0.52 2.677±0.89
ENSMUST00000163497 13.956±0.00 3.028±0.24 N/A N/A 3.800±0.30 3.616±0.85 N/A N/A N/A 3.239±0.34 N/A 14.298±2.03 N/A N/A
ENSMUST00000164034 N/A 0.853±0.00 N/A N/A 1.897±0.00 1.125±0.07 N/A N/A 2.128±0.00 1.278±0.02 N/A 3.887±0.58 1.732±0.00 4.751±1.24
ENSMUST00000164212 N/A 2.551±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167384 N/A 0.866±0.23 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168117 N/A 0.619±0.00 N/A N/A 1.244±0.17 1.197±0.06 N/A N/A N/A N/A N/A 2.968±0.17 1.493±0.00 3.660±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0007264 IEA small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079468 RHOBTB1 Rho-related BTB domain containing 1 protein_coding Danio_rerio
ENSG00000072422 RHOBTB1 Rho-related BTB domain containing 1 protein_coding Homo_sapiens

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