| Transcript ID | Placenta |
|---|---|
| ENST00000443047 | 4.595±0.00 |
| ENST00000450056 | 7.660±3.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSG00000072609  |
CHFR | 9606 | - |
12:132822187-132956304  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENST00000266880 |
CHFR-001 | 132832357-132887598 | protein_coding | ||
| ENST00000315585 |
CHFR-010 | 132840910-132883017 | nonsense_mediated_decay | ||
| ENST00000432561 |
CHFR-002 | 132840975-132887608 | protein_coding | ||
| ENST00000443047 |
CHFR-004 | 132840352-132887603 | protein_coding | ||
| ENST00000450056 |
CHFR-003 | 132840352-132887623 | protein_coding | ||
| ENST00000499045 |
CHFR-011 | 132877561-132909186 | processed_transcript | ||
| ENST00000502279 |
CHFR-023 | 132848155-132849960 | retained_intron | ||
| ENST00000511001 |
CHFR-019 | 132853637-132855055 | processed_transcript | ||
| ENST00000535181 |
CHFR-016 | 132871905-132887564 | retained_intron | ||
| ENST00000535527 |
CHFR-021 | 132841373-132856565 | nonsense_mediated_decay | ||
| ENST00000535897 |
CHFR-018 | 132859079-132861904 | retained_intron | ||
| ENST00000536196 |
CHFR-017 | 132871973-132887572 | processed_transcript | ||
| ENST00000536843 |
CHFR-008 | 132840349-132848991 | retained_intron | ||
| ENST00000536932 |
CHFR-027 | 132869724-132956304 | protein_coding | ||
| ENST00000537551 |
CHFR-015 | 132870725-132887522 | processed_transcript | ||
| ENST00000538235 |
CHFR-022 | 132841393-132853489 | processed_transcript | ||
| ENST00000540537 |
CHFR-005 | 132869619-132909147 | protein_coding | ||
| ENST00000540963 |
CHFR-014 | 132861547-132887532 | protein_coding | ||
| ENST00000541341 |
CHFR-028 | 132822187-132848192 | retained_intron | ||
| ENST00000541817 |
CHFR-012 | 132859185-132904894 | protein_coding | ||
| ENST00000542714 |
CHFR-013 | 132869639-132904873 | protein_coding | ||
| ENST00000544093 |
CHFR-020 | 132841125-132851658 | nonsense_mediated_decay | ||
| ENST00000544268 |
CHFR-007 | 132840405-132854104 | retained_intron | ||
| ENST00000545046 |
CHFR-009 | 132840352-132847802 | retained_intron | ||
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00006K | CIL_00006K_0002 | CGP | 12:132725503-132828858 |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IDA | nucleotide binding |
| GO:0000209 | IDA | protein polyubiquitination |
| GO:0000278 | IEA | mitotic cell cycle |
| GO:0004842 | IDA | ubiquitin-protein transferase activity |
| GO:0005515 | IEA | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0006511 | IEA | ubiquitin-dependent protein catabolic process |
| GO:0007067 | IEA | mitotic nuclear division |
| GO:0007093 | TAS | mitotic cell cycle checkpoint |
| GO:0008270 | IEA | zinc ion binding |
| GO:0016605 | IDA | PML body |
| GO:0016874 | IEA | ligase activity |
| GO:0019941 | IDA | modification-dependent protein catabolic process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Description | Biotype | Species | |
|
ENSDARG00000075347
|
chfr | checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase | protein_coding | Danio_rerio | |
|
ENSMUSG00000014668
|
Chfr | checkpoint with forkhead and ring finger domains | protein_coding | Mus_musculus | |
