C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lectin, mannose-binding, 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000074695 LMAN1 9606 - 18:59327823-59359962 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000251047 LMAN1-001 59327823-59359962 protein_coding
  ENST00000587561 LMAN1-005 59352681-59359265 retained_intron
  ENST00000587918 LMAN1-003 59331463-59333691 retained_intron
  ENST00000587940 LMAN1-002 59345971-59351589 processed_transcript
  ENST00000592562 LMAN1-004 59330776-59331639 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000251047
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000251047 16.275±0.00 3.232±0.00 6.706±0.00 3.417±1.46 9.826±0.08 10.572±2.34 8.183±2.48 18.471±4.16 15.445±7.87 12.073±3.00 6.282±2.73 10.645±3.25 16.969±7.56 9.908±0.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004H6 CIL_0004H6_0001 CGP 18:59275156-59359962
CIL_0001P5 CIL_0001P5_0001 CGP 18:59327823-59697380

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005515 IPI protein binding
GO:0005537 TAS mannose binding
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005793 IDA endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 IEA Golgi apparatus
GO:0006457 TAS protein folding
GO:0006888 TAS ER to Golgi vesicle-mediated transport
GO:0007029 IEA endoplasmic reticulum organization
GO:0007030 IMP Golgi organization
GO:0007596 TAS blood coagulation
GO:0010638 IMP positive regulation of organelle organization
GO:0012507 TAS ER to Golgi transport vesicle membrane
GO:0016020 IDA:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0030017 IEA sarcomere
GO:0030134 IEA ER to Golgi transport vesicle
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding
GO:0051082 TAS unfolded protein binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000041891 Lman1 lectin, mannose-binding, 1 protein_coding Mus_musculus

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