C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001P5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000074695-ENSG00000183287 CGP 9606 18:59327823-59697380
GeneTranscriptPositionBiotype
ENSG00000074695 (LMAN1)
lectin, mannose-binding, 1 		ENST00000251047 (LMAN1-001) 59327823-59359962 protein_coding
ENST00000587561 (LMAN1-005) 59352681-59359265 retained_intron
ENST00000587918 (LMAN1-003) 59331463-59333691 retained_intron
ENST00000587940 (LMAN1-002) 59345971-59351589 processed_transcript
ENST00000592562 (LMAN1-004) 59330776-59331639 retained_intron
ENSG00000183287 (CCBE1)
collagen and calcium binding EGF domains 1 		ENST00000398179 (CCBE1-201) 59430940-59480240 protein_coding
ENST00000439986 (CCBE1-001) 59430940-59697380 protein_coding
ENST00000589116 (CCBE1-002) 59435146-59455212 retained_intron
ENST00000589419 (CCBE1-004) 59448046-59666162 protein_coding
ENSG00000267000 (RP11-27G24.3)
 ENST00000589242 (RP11-27G24.3-001) 59459072-59465682 antisense
ENSG00000267061 (RP11-760L24.1)
 ENST00000586841 (RP11-760L24.1-001) 59563709-59568615 antisense
ENSG00000267269 (RP11-2N1.1)
 ENST00000588298 (RP11-2N1.1-001) 59685820-59688400 antisense
ENSG00000267677 (RP11-27G24.1)
 ENST00000591331 (RP11-27G24.1-001) 59360700-59386749 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0001P5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041891-ENSMUSG00000046318 CGP 10090 18:65980754-66302739
GeneTranscriptPositionBiotype
ENSMUSG00000041891 (Lman1)
lectin, mannose-binding, 1 		ENSMUST00000048260 (Lman1-001) 65980754-66002637 protein_coding
ENSMUST00000120461 (Lman1-002) 65983207-66002621 protein_coding
ENSMUST00000143990 (Lman1-003) 65993138-66022580 protein_coding
ENSMUST00000144793 (Lman1-005) 65991151-65993660 retained_intron
ENSMUST00000150133 (Lman1-004) 65993591-66019778 processed_transcript
ENSMUST00000155895 (Lman1-006) 65989026-65994888 processed_transcript
ENSMUSG00000046318 (Ccbe1)
collagen and calcium binding EGF domains 1 		ENSMUST00000061103 (Ccbe1-005) 66056855-66291788 nonsense_mediated_decay
ENSMUST00000130300 (Ccbe1-001) 66060967-66291838 protein_coding
ENSMUST00000146610 (Ccbe1-003) 66045302-66291446 processed_transcript
ENSMUST00000151343 (Ccbe1-002) 66269028-66302739 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001P5_0001ENSG00000074695ENST00000251047ENST00000587561ENST00000587918ENST00000587940ENST00000592562ENSG00000183287ENST00000398179ENST00000439986ENST00000589116ENST00000589419ENSG00000267000ENST00000589242ENSG00000267061ENST00000586841ENSG00000267269ENST00000588298ENSG00000267677ENST00000591331CIL_0001P5_0002ENSMUSG00000041891ENSMUST00000048260ENSMUST00000120461ENSMUST00000143990ENSMUST00000144793ENSMUST00000150133ENSMUST00000155895ENSMUSG00000046318ENSMUST00000061103ENSMUST00000130300ENSMUST00000146610ENSMUST00000151343
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001P5_0001ENSG00000074695ENST00000251047ENSG00000183287ENST00000398179ENST00000439986ENST00000589116ENST00000589419ENSG00000267000ENST00000589242ENSG00000267061ENST00000586841ENSG00000267269ENST00000588298ENSG00000267677ENST00000591331CIL_0001P5_0002ENSMUSG00000041891ENSMUST00000048260ENSMUST00000120461ENSMUST00000150133ENSMUST00000155895ENSMUSG00000046318ENSMUST00000061103ENSMUST00000130300
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000074695 ENST00000251047 16.275±0.00 3.232±0.00 6.706±0.00 3.417±1.46 9.826±0.08 10.572±2.34 8.183±2.48 18.471±4.16 15.445±7.87 12.073±3.00 6.282±2.73 10.645±3.25 16.969±7.56 9.908±0.77
ENST00000587561 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000183287 ENST00000398179 N/A N/A N/A 0.577±0.00 0.349±0.00 1.858±0.00 0.429±0.00 0.731±0.00 0.337±0.00 N/A 0.022±0.00 N/A 0.017±0.00 0.466±0.00
ENST00000439986 2.510±0.00 0.332±0.00 0.154±0.00 0.086±0.04 0.299±0.07 2.353±1.79 0.105±0.00 0.343±0.26 0.306±0.01 3.034±1.66 0.232±0.00 4.717±2.52 N/A 0.230±0.07
ENST00000589116 N/A N/A 0.715±0.00 0.303±0.00 N/A N/A 0.260±0.00 0.428±0.00 N/A N/A 0.547±0.00 N/A 0.010±0.00 N/A
ENST00000589419 N/A N/A 3.045±0.00 0.918±0.00 1.775±0.00 N/A N/A 3.868±0.00 N/A 8.869±0.00 N/A 7.895±0.00 N/A N/A
ENSG00000267000 ENST00000589242 N/A 0.281±0.00 N/A 0.058±0.00 0.115±0.03 0.410±0.00 N/A 0.197±0.17 N/A 0.123±0.00 N/A N/A 0.176±0.00 0.251±0.00
ENSG00000267061 ENST00000586841 0.146±0.00 N/A N/A N/A 0.459±0.00 N/A N/A N/A 0.184±0.00 0.163±0.00 N/A 0.477±0.00 N/A 0.726±0.45
ENSG00000267269 ENST00000588298 0.178±0.00 0.045±0.00 N/A 0.023±0.00 N/A N/A N/A N/A 0.038±0.00 N/A N/A 0.056±0.00 N/A 0.531±0.06
ENSG00000267677 ENST00000591331 N/A N/A N/A 0.040±0.00 0.187±0.00 N/A 0.104±0.00 N/A N/A N/A 1.294±1.10 0.204±0.00 N/A 0.102±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041891 ENSMUST00000048260 15.191±4.18 30.440±4.58 11.978±1.48 5.681±1.85 10.803±1.55 14.403±3.15 10.437±2.42 17.803±3.20 43.415±16.52 16.528±4.89 7.954±0.26 24.234±6.39 28.384±7.71 2.329±0.94
ENSMUST00000120461 N/A 60.878±2.37 N/A N/A N/A N/A 3.265±0.00 N/A N/A 5.319±0.57 N/A 12.686±4.88 11.481±0.26 1.547±0.35
ENSMUST00000143990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.382±0.00
ENSMUST00000155895 N/A N/A N/A 12.941±0.00 N/A N/A N/A N/A N/A N/A N/A 67.310±0.00 47.330±0.23 10.197±0.00
ENSMUSG00000046318 ENSMUST00000061103 0.208±0.09 6.589±1.62 0.138±0.00 0.215±0.12 0.574±0.36 0.260±0.13 0.617±0.08 0.516±0.16 0.492±0.24 0.805±0.22 0.172±0.09 18.725±7.80 0.347±0.10 0.927±0.49
ENSMUST00000130300 0.184±0.00 9.779±0.00 N/A N/A 0.666±0.39 0.603±0.10 N/A 0.800±0.00 0.510±0.15 1.467±0.27 0.077±0.00 N/A N/A 2.666±0.81
ENSMUST00000146610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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