C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: syntaxin binding protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000076944 STXBP2 9606 + 19:7636881-7647873 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000221283 STXBP2-001 7637119-7647873 protein_coding
  ENST00000414284 STXBP2-002 7637127-7647873 protein_coding
  ENST00000441779 STXBP2-003 7637113-7647872 protein_coding
  ENST00000593535 STXBP2-006 7636881-7641005 protein_coding
  ENST00000593854 STXBP2-014 7644349-7646438 retained_intron
  ENST00000594221 STXBP2-012 7641830-7643210 retained_intron
  ENST00000595181 STXBP2-009 7637113-7640156 retained_intron
  ENST00000595800 STXBP2-020 7644513-7647872 retained_intron
  ENST00000595861 STXBP2-013 7642246-7643274 retained_intron
  ENST00000595950 STXBP2-007 7637105-7642118 protein_coding
  ENST00000597068 STXBP2-004 7637122-7647810 nonsense_mediated_decay
  ENST00000597467 STXBP2-008 7637105-7639464 retained_intron
  ENST00000599278 STXBP2-018 7647055-7647455 retained_intron
  ENST00000599400 STXBP2-016 7643215-7647838 nonsense_mediated_decay
  ENST00000599558 STXBP2-015 7644566-7645394 retained_intron
  ENST00000599648 STXBP2-011 7640741-7641913 retained_intron
  ENST00000599737 STXBP2-005 7638737-7647844 nonsense_mediated_decay
  ENST00000599905 STXBP2-010 7637115-7639485 retained_intron
  ENST00000600702 STXBP2-019 7642781-7647873 protein_coding
  ENST00000601061 STXBP2-017 7645196-7647873 retained_intron
  ENST00000602355 STXBP2-022 7645959-7647810 protein_coding
  ENST00000612033 STXBP2-201 7639841-7641201 protein_coding
  ENST00000622853 STXBP2-202 7637101-7647872 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000221283ENST00000414284ENST00000441779ENST00000595861ENST00000599737
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000221283 N/A N/A N/A N/A 18.367±0.00 7.021±0.00 3.589±0.00 14.195±6.50 44.021±10.87 38.226±0.00
ENST00000414284 5.855±0.00 33.330±0.00 10.174±0.00 N/A 15.732±0.00 4.732±0.00 N/A 4.075±2.86 N/A 36.812±0.00
ENST00000441779 N/A N/A 1.773±0.00 1.844±0.00 N/A N/A N/A N/A N/A N/A
ENST00000595861 N/A N/A N/A 8.578±0.00 N/A N/A N/A 46.507±0.00 55.870±0.00 57.842±0.00
ENST00000599737 N/A N/A N/A N/A N/A N/A N/A 1.224±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00010X CIL_00010X_0001 CGP 19:7631611-7647873
CIL_00035H CIL_00035H_0001 CGP 19:7636881-7670454

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001909 IMP leukocyte mediated cytotoxicity
GO:0005515 IPI protein binding
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0006887 IEA exocytosis
GO:0006904 IEA vesicle docking involved in exocytosis
GO:0015031 IEA protein transport
GO:0016192 IEA vesicle-mediated transport
GO:0016324 IEA apical plasma membrane
GO:0017075 IEA syntaxin-1 binding
GO:0030348 IPI syntaxin-3 binding
GO:0031201 IDA SNARE complex
GO:0042581 IDA specific granule
GO:0042582 IDA azurophil granule
GO:0043304 ISS regulation of mast cell degranulation
GO:0043312 IEP neutrophil degranulation
GO:0044194 IDA cytolytic granule
GO:0070062 IDA extracellular vesicular exosome
GO:0070820 IDA tertiary granule

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007603 stxbp2 syntaxin binding protein 2 protein_coding Danio_rerio
ENSMUSG00000004626 Stxbp2 syntaxin binding protein 2 protein_coding Mus_musculus

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