C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: syntaxin binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000599737 STXBP2-005 ENSG00000076944 9606 + 19:7638737-7647844 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000599737
Transcript ID Ovary
ENST00000599737 1.224±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00010X CIL_00010X_0001 CGP 19:7631611-7647873
CIL_00035H CIL_00035H_0001 CGP 19:7636881-7670454

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006904 IEA vesicle docking involved in exocytosis
GO:0016192 IEA vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000004745 Stxbp2-002 protein_coding Mus_musculus 0 1002
ENSMUST00000160708 Stxbp2-001 protein_coding Mus_musculus 0 1002
ENSMUST00000162737 Stxbp2-006 retained_intron Mus_musculus 0 462
ENSMUST00000159888 Stxbp2-005 processed_transcript Mus_musculus 0 462
ENSMUST00000163044 Stxbp2-007 retained_intron Mus_musculus 0 414
ENSMUST00000162867 Stxbp2-003 processed_transcript Mus_musculus 0 318
ENSMUST00000162974 Stxbp2-010 retained_intron Mus_musculus 0 268
ENSMUST00000160435 Stxbp2-011 processed_transcript Mus_musculus 0 254
ENSMUST00000161982 Stxbp2-008 retained_intron Mus_musculus 0 243

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